Mingyang Lu

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All published works

Action	Title	Year	Authors
+	Decoding the mechanisms underlying cell-fate decision-making during stem cell differentiation by random circuit perturbation	2020	Bin Huang Mingyang Lu Madeline Galbraith Herbert Levine José N. Onuchic Dongya Jia
+	Decoding the mechanisms underlying cell-fate decision-making during stem cell differentiation by Random Circuit Perturbation	2020	Bin Huang Mingyang Lu Madeline Galbraith Herbert Levine José N. Onuchic Dongya Jia
+ PDF Chat	Modularity of the metabolic gene network as a prognostic biomarker for hepatocellular carcinoma	2018	Fengdan Ye Dongya Jia Mingyang Lu Herbert Levine Michael W. Deem
+ PDF Chat	Modularity of the metabolic gene network as a prognostic biomarker for hepatocellular carcinoma	2017	Fengdan Ye Dongya Jia Mingyang Lu Herbert Levine Michael W. Deem
+	Distinguishing mechanisms underlying EMT tristability	2017	Dongya Jia Mohit Kumar Jolly S. C. Tripathi Petra den Hollander Bin Huang Mingyang Lu Müge Çeliktaş Esmeralda Ramirez‐Peña Eshel Ben‐Jacob José N. Onuchic
+ PDF Chat	Distinguishing Mechanisms Underlying EMT Tristability	2017	Dongya Jia Mohit Kumar Jolly S. C. Tripathi Petra den Hollander Bin Huang Mingyang Lu Müge Çeliktaş Esmeralda Ramirez‐Peña Eshel Ben‐Jacob José N. Onuchic
+	Modularity of the metabolic gene network as a prognostic biomarker for hepatocellular carcinoma	2017	Fengdan Ye Dongya Jia Mingyang Lu Herbert Levine Michael W. Deem
+	Distinguishing Mechanisms Underlying EMT Tristability	2017	Dongya Jia Mohit Kumar Jolly S. C. Tripathi Petra den Hollander Bin Huang Mingyang Lu Müge Çeliktaş Esmeralda Ramirez‐Peña Eshel Ben‐Jacob José N. Onuchic
+	Implications of the hybrid epithelial/mesenchymal phenotype in metastasis	2015	Mohit Kumar Jolly Marcelo Boareto Bin Huang Dongya Jia Mingyang Lu José N. Onuchic Herbert Levine Eshel Ben‐Jacob
+ PDF Chat	Implications of the Hybrid Epithelial/Mesenchymal Phenotype in Metastasis	2015	Mohit Kumar Jolly Marcelo Boareto Bin Huang Dongya Jia Mingyang Lu Eshel Ben‐Jacob José N. Onuchic Herbert Levine
+	OPUS-Beta: A Statistical Potential for Beta-Sheet Contact Pattern in Proteins	2015	Linglin Yu Mingyang Lu Tianwu Zang Jianpeng
+	Implications of the hybrid epithelial/mesenchymal phenotype in metastasis	2015	Mohit Kumar Jolly Marcelo Boareto Bin Huang Dongya Jia Mingyang Lu José N. Onuchic Herbert Levine Eshel Ben‐Jacob
+ PDF Chat	Construction of an Effective Landscape for Multistate Genetic Switches	2014	Mingyang Lu José N. Onuchic Eshel Ben‐Jacob

Common Coauthors

Coauthor	Papers Together
Herbert Levine	11
Dongya Jia	11
José N. Onuchic	9
Eshel Ben‐Jacob	7
Mohit Kumar Jolly	6
Bin Huang	6
S. C. Tripathi	3
Samir Hanash	3
Müge Çeliktaş	3
Michael W. Deem	3
Marcelo Boareto	3
Fengdan Ye	3
Esmeralda Ramirez‐Peña	3
Sendurai A. Mani	3
Petra den Hollander	3
Madeline Galbraith	2
Bin Huang	2
Tianwu Zang	1
Linglin Yu	1
Jianpeng	1

Commonly Cited References

Action	Title	Year	Authors	# of times referenced
+ PDF Chat	Stochastic State Transitions Give Rise to Phenotypic Equilibrium in Populations of Cancer Cells	2011	Piyush B. Gupta Christine M. Fillmore Guozhi Jiang Sagi Shapira Kai Tao Charlotte Kuperwasser Eric S. Lander	5
+ PDF Chat	Temporally sequenced anticancer drugs overcome adaptive resistance by targeting a vulnerable chemotherapy-induced phenotypic transition	2015	Aaron Goldman Biswanath Majumder Andrew Dhawan Sudharshan Ravi David Goldman Mohammad Kohandel Pradip K. Majumder Shiladitya Sengupta	5
+ PDF Chat	Hierarchy in gene expression is predictive of risk, progression, and outcome in adult acute myeloid leukemia	2015	Shubham Tripathi Michael W. Deem	3
+ PDF Chat	Hierarchy of gene expression data is predictive of future breast cancer outcome	2013	Man Chen Michael W. Deem	3
+	Modularity and community structure in networks	2006	M. E. J. Newman	3
+	Community structure in social and biological networks	2002	Michelle Girvan M. E. J. Newman	3
+ PDF Chat	Construction of an Effective Landscape for Multistate Genetic Switches	2014	Mingyang Lu José N. Onuchic Eshel Ben‐Jacob	3
+ PDF Chat	Spontaneous Emergence of Modularity in a Model of Evolving Individuals	2007	Jun Sun Michael W. Deem	3
+ PDF Chat	Implications of the Hybrid Epithelial/Mesenchymal Phenotype in Metastasis	2015	Mohit Kumar Jolly Marcelo Boareto Bin Huang Dongya Jia Mingyang Lu Eshel Ben‐Jacob José N. Onuchic Herbert Levine	2
+ PDF Chat	Non-genetic heterogeneity, criticality and cell differentiation	2014	Mainak Pal Sayantari Ghosh Indrani Bose	2
+	Sparse principal component analysis and iterative thresholding	2013	Zongming Ma	2
+ PDF Chat	Coupled Reversible and Irreversible Bistable Switches Underlying TGFβ-induced Epithelial to Mesenchymal Transition	2013	Xiao‐Jun Tian Hang Zhang Jianhua Xing	2
+ PDF Chat	Transcriptional regulation by the numbers: models	2005	Lacramioara Bintu Nicolas E. Buchler Hernán G. García Ulrich Gerland Terence Hwa Jané Kondev Rob Phillips	2
+	How to make a Biological Switch	2000	Joshua L. Cherry Frederick R. Adler	2
+ PDF Chat	Cancer stem cells: small subpopulation or evolving fraction?	2014	Heiko Enderling	2
+ PDF Chat	Formalizing an Integrative, Multidisciplinary Cancer Therapy Discovery Workflow	2013	Mary F. McGuire Heiko Enderling Dorothy Wallace Jaspreet S. Batra Marie Jordan Sushil Kumar John C. Panetta Eddy Pasquier	2
+ PDF Chat	Systems Biology of Tumor Dormancy: Linking Biology and Mathematics on Multiple Scales to Improve Cancer Therapy	2012	Heiko Enderling Philip Hahnfeldt Lynn Hlatky Nava Almog	2
+ PDF Chat	Funnels, pathways, and the energy landscape of protein folding: A synthesis	1995	Joseph D. Bryngelson José N. Onuchic Nicholas D. Socci Peter G. Wolynes	2
+ PDF Chat	Brain Modularity Mediates the Relation between Task Complexity and Performance	2017	Qiuhai Yue Randi C. Martin Simon Fischer‐Baum Aurora I. Ramos-Nuñez Fengdan Ye Michael W. Deem	2
+ PDF Chat	Brain Modularity Mediates the Relation between Task Complexity and Performance	2017	Qiuhai Yue Randi C. Martin Simon Fischer‐Baum Aurora I. Ramos-Nuñez Fengdan Ye Michael W. Deem	2
+ PDF Chat	Cancer stem cells display extremely large evolvability: alternating plastic and rigid networks as a potential Mechanism: network models, novel therapeutic target strategies, and the contributions of hypoxia, inflammation and cellular senescence.	2015	Péter Csermely János Hódsági Tamás Korcsmáros Dezső Módos Áron R. Perez-Lopez Kristóf Z. Szalay Dániel V. Veres Katalin Lenti Ling Yun Wu Xiang-Sun Zhang	2
+	Quasi-potential landscape in complex multi-stable systems	2012	Joseph Zhou M. D. S. Aliyu Erik Aurell Sui Huang	1
+	Generalized eigenproblem algorithms and software for algebraic Riccati equations	1984	W.F. Arnold Alan J. Laub	1
+ PDF Chat	Absolute rate theories of epigenetic stability	2005	Aleksandra M. Walczak José N. Onuchic Peter G. Wolynes	1
+	Exact stochastic simulation of coupled chemical reactions	1977	Daniel T. Gillespie	1
+	Partial Differential Equations	2010	Lawrence Evans	1
+ PDF Chat	Tumor Invasion Optimization by Mesenchymal-Amoeboid Heterogeneity	2015	Inbal Hecht Yasmin Bar-El Frederic Balmer Sari Natan Ilan Tsarfaty Frank Schweitzer Eshel Ben‐Jacob	1
+ PDF Chat	Detecting intrinsic slow variables in stochastic dynamical systems by anisotropic diffusion maps	2009	Amit Singer Radek Erban Ioannis G. Kevrekidis Ronald R. Coifman	1
+ PDF Chat	Optimal path to epigenetic switching	2005	David Marin Roma Ruadhan A. O’Flanagan Andrei E. Ruckenstein Anirvan M. Sengupta Ranjan Mukhopadhyay	1
+ PDF Chat	Cancer stem cells display extremely large evolvability: alternating plastic and rigid networks as a potential Mechanism	2014	Péter Csermely János Hódsági Tamás Korcsmáros Dezső Módos Áron R. Perez-Lopez Kristóf Z. Szalay Dániel V. Veres Katalin Lenti Ling‐Yun Wu Yu Xia	1
+ PDF Chat	Determining the Stability of Genetic Switches: Explicitly Accounting for mRNA Noise	2011	Michael Assaf Elijah Roberts Zaida Luthey‐Schulten	1
+ PDF Chat	Self-Consistent Proteomic Field Theory of Stochastic Gene Switches	2004	Aleksandra M. Walczak Masaki Sasai Peter G. Wolynes	1
+ PDF Chat	Escape problem for irreversible systems	1993	Robert S. Maier D. L. Stein	1
+ PDF Chat	Biological Networks Regulating Cell Fate Choice are Minimally Frustrated	2020	Shubham Tripathi David A. Kessler Herbert Levine	1
+ PDF Chat	Stochasticity in Transcriptional Regulation: Origins, Consequences, and Mathematical Representations	2001	Thomas B. Kepler Timothy C. Elston	1