Shintaro Nagata

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All published works

Action	Title	Year	Authors
+ PDF Chat	Emergence of cooperative bistability and robustness of gene regulatory networks	2020	Shintaro Nagata Macoto Kikuchi

Common Coauthors

Coauthor	Papers Together
Macoto Kikuchi	1

Commonly Cited References

Action	Title	Year	Authors	# of times referenced
+	New Monte Carlo algorithm: Entropic sampling	1993	Jooyoung Lee	1
+ PDF Chat	Detection of multistability, bifurcations, and hysteresis in a large class of biological positive-feedback systems	2004	David Angeli James E. Ferrell Eduardo D. Sontag	1
+ PDF Chat	Determining the density of states for classical statistical models: A random walk algorithm to produce a flat histogram	2001	Fugao Wang D. P. Landau	1
+ PDF Chat	Motifs emerge from function in model gene regulatory networks	2011	Z. Burda A. Krzywicki Olivier Martin Marcin Zagórski	1
+ PDF Chat	Edge usage, motifs, and regulatory logic for cell cycling genetic networks	2013	Marcin Zagórski A. Krzywicki Olivier Martin	1
+ PDF Chat	Efficient, Multiple-Range Random Walk Algorithm to Calculate the Density of States	2001	Fugao Wang D. P. Landau	1
+ PDF Chat	Probability of graphs with large spectral gap by multicanonical Monte Carlo	2010	Nen Saito Yukito Iba	1
+ PDF Chat	Multicanonical sampling of rare events in random matrices	2010	Nen Saito Yukito Iba Koji Hukushima	1
+	Multicanonical algorithms for first order phase transitions	1991	Bernd A. Berg Thomas Neuhaus	1
+	Bistability in cell signaling: How to make continuous processes discontinuous, and reversible processes irreversible	2001	James E. Ferrell Wen‐Cheng Xiong	1
+ PDF Chat	Multicanonical sampling of rare trajectories in chaotic dynamical systems	2010	Akimasa Kitajima Yukito Iba	1
+ PDF Chat	A Generic Mechanism for Adaptive Growth Rate Regulation	2008	Chikara Furusawa Kunihiko Kaneko	1
+	Stochastic gene expression as a many-body problem	2003	Masaki Sasai Peter G. Wolynes	1
+ PDF Chat	Phenotypic robustness can increase phenotypic variability after nongenetic perturbations in gene regulatory circuits	2011	Carlos Espinosa‐Soto Olivier Martin Andreas Wagner	1
+ PDF Chat	Spin glasses and the statistical mechanics of protein folding.	1987	Joseph D. Bryngelson Peter G. Wolynes	1
+ PDF Chat	Multicanonical ensemble: A new approach to simulate first-order phase transitions	1992	Bernd A. Berg Thomas Neuhaus	1
+ PDF Chat	Evolution of Robustness to Noise and Mutation in Gene Expression Dynamics	2007	Kunihiko Kaneko	1
+ PDF Chat	Bistability in the JNK cascade	2001	Christoph P. Bagowski James E. Ferrell	1
+ PDF Chat	Cooperative reliable response from sloppy gene-expression dynamics	2018	Masayo Inoue Kunihiko Kaneko	1
+	Modeling network dynamics: the lac operon, a case study	2004	José M. G. Vilar Călin C. Guet Stanislas Leibler	1
+ PDF Chat	Multicanonical MCMC for sampling rare events: an illustrative review	2014	Yukito Iba Nen Saito Akimasa Kitajima	1
+ PDF Chat	Robustness leads close to the edge of chaos in coupled map networks: toward the understanding of biological networks	2013	Nen Saito Macoto Kikuchi	1