John C. Whittaker

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All published works

Action	Title	Year	Authors
+ PDF Chat	Simulation-based Benchmarking for Causal Structure Learning in Gene Perturbation Experiments	2024	Luka Kovačević Izzy Newsham Sach Mukherjee John C. Whittaker
+ PDF Chat	A frequentist test of proportional colocalization after selecting relevant genetic variants	2024	Ashish Patel John C. Whittaker Stephen Burgess
+ PDF Chat	Using genetic association data to guide drug discovery and development: Review of methods and applications	2023	Stephen Burgess Amy M. Mason Andrew J. Grant Eric A. W. Slob Apostolos Gkatzionis Verena Zuber Ashish Patel Haodong Tian Cunhao Liu William G. Haynes
+ PDF Chat	Causal analyses, statistical efficiency and phenotypic precision through Recall-by-Genotype study design	2017	Laura J. Corbin Vanessa Y. Tan David A. Hughes Kaitlin H. Wade Dirk S. Paul Katherine E. Tansey Frances Butcher Frank Dudbridge Joanna M. M. Howson Momodou W. Jallow
+ PDF Chat	The impact of targeting all elderly persons in England and Wales for yearly influenza vaccination: excess mortality due to pneumonia or influenza and time trend study	2013	Andrea G Mann Punam Mangtani Colin A. Russell John C. Whittaker
+ PDF Chat	A Comparison of <scp>B</scp>ayesian and Frequentist Approaches to Incorporating External Information for the Prediction of Prostate Cancer Risk	2012	Paul J. Newcombe Brian H. Reck Jielin Sun Greg T. Platek Claudio Verzilli A. Karim Kader Seong‐Tae Kim Fang‐Chi Hsu Zheng Zhang S. Lilly Zheng
+ PDF Chat	How informative is a negative finding in a small pharmacogenetic study?	2011	Silviu‐Alin Bacanu John C. Whittaker Matthew R. Nelson
+ PDF Chat	Bayesian methods for meta‐analysis of causal relationships estimated using genetic instrumental variables	2010	Stephen Burgess Simon G. Thompson Gavin Andrews Nilesh J. Samani Alistair S. Hall Peter H. Whincup Richard Morris Debbie A. Lawlor George Davey Smith Nicholas J. Timpson
+	Generic reversible jump MCMC using graphical models	2008	David J. Lunn Nicky Best John C. Whittaker
+	Large scale association studies: Implications for FDRs and a simple Bayesian alternative	2007	James E. Chapman Claudio Verzilli John C. Whittaker
+ PDF Chat	Limits to Causal Inference based on Mendelian Randomization: A Comparison with Randomized Controlled Trials	2006	Dorothea Nitsch Mariam Molokhia Liam Smeeth Bianca DeStavola John C. Whittaker David A. Leon
+	Statistical design and analysis of pharmacogenetic trials	2005	Patrick J. Kelly Nigel Stallard John C. Whittaker
+ PDF Chat	Finite-Sample Properties of Family-Based Association Tests	1999	John C. Whittaker Deborah J. Thompson
+	Geometry, moments and Bayesian networks with hidden variables	1999	David Heckerman John C. Whittaker
+	Finite sample properties of tests for allelic association.	1998	John C. Whittaker Deborah J. Thompson

Common Coauthors

Coauthor	Papers Together
Stephen Burgess	3
Claudio Verzilli	2
Ashish Patel	2
Nicholas J. Timpson	2
Deborah J. Thompson	2
Liam Smeeth	2
G. Kees Hovingh	1
Dorothea Nitsch	1
Catherine John	1
Simon G. Thompson	1
David A. van Heel	1
Colin A. Russell	1
Chong Wu	1
Emanuele Di Angelantonio	1
Cunhao Liu	1
Chris J. Packard	1
Jennifer F. Yamamoto	1
Stephen O’Rahilly	1
Frank Dudbridge	1
Graeme J. Hankey	1
Vanessa Y. Tan	1
David Heckerman	1
John Danesh	1
Ioanna Tzoulaki	1
Andrew J. Grant	1
Benedetta Chiodini	1
Roger S. Rittmaster	1
Verena Zuber	1
Dirk S. Paul	1
Matthew A. Brown	1
Paul W. Franks	1
Izzy Newsham	1
George Davey Smith	1
Mary Cushman	1
Richard Morris	1
Timothy M. Frayling	1
Gavin Andrews	1
Amy M. Mason	1
Vincent Mooser	1
Danish Saleheen	1
Nathalie Kingston	1
Sally L. Ricketts	1
Jianfeng Xu	1
J. P. Casas	1
Michele Robertson	1
C. Verzilli	1
Nicole M. Warrington	1
Hugh Watkins	1
Lyle J. Palmer	1
Silviu‐Alin Bacanu	1

Commonly Cited References

Action	Title	Year	Authors	# of times referenced
+	None	2000	David J. Lunn Andrew C. Thomas Nicky Best David J. Spiegelhalter	2
+	Reversible jump Markov chain Monte Carlo computation and Bayesian model determination	1995	Peter J. Green	2
+	An introduction to instrumental variables for epidemiologists	2000	Sander Greenland	2
+	Bayesian Analysis of Linear and Non-Linear Population Models by Using the Gibbs Sampler	1994	J. C. Wakefield A. F. M. Smith Amy Racine-Poon Alan E. Gelfand	1
+	Convergence Assessment for Reversible Jump MCMC Simulations	1999	Stephen P. Brooks Paolo Giudici	1
+	Bayesian analysis of population PK/PD models: general concepts and software.	2002	David J. Lunn Nicky Best Andrew C. Thomas Jon Wakefield David J. Spiegelhalter	1
+	Bayesian Model Choice Via Markov Chain Monte Carlo Methods	1995	Bradley P. Carlin Siddhartha Chib	1
+	Minimum Sample Size Estimation to Detect Gene-Environment Interaction in Case-Control Designs	1994	Shih-Jen Hwang Terri H. Beaty Kung‐Yee Liang Josef Coresh Muin J. Khoury	1
+	Testing drug response in the presence of genetic information: sampling issues for clinical trials	2000	Lon R. Cardon Ramana M. Idury Timothy Harris John S. Witte Robert C. Elston	1
+	Bayesian residual analysis for binary response regression models	1995	Jim Albert Siddhartha Chib	1
+	Decline in influenza-associated mortality among Dutch elderly following the introduction of a nationwide vaccination program	2008	Angelique G.S.C. Jansen Elisabeth A. M. Sanders Kristin L. Nichol Anton M. van Loon Arno W. Hoes Eelko Hak	1
+ PDF Chat	Limited information estimators and exogeneity tests for simultaneous probit models	1988	Douglas Rivers Quang Vuong	1
+	Bayesian finite mixtures with an unknown number of components: The allocation sampler	2007	Agostino Nobile Alastair T. Fearnside	1
+	Statistics and Causal Inference	1986	Paul W. Holland	1
+	A semi-parametric Bayesian approach to the instrumental variable problem	2008	Timothy G. Conley Christian Hansen Robert E. McCulloch Peter E. Rossi	1
+	Influenza vaccine coverage, influenza-associated morbidity and all-cause mortality in Catalonia (Spain)	2011	M. Pilar Muñoz Núria Soldevila Anna Martínez Glòria Carmona J. Batalla Lesly Acosta Ángela Domı́nguez	1
+	Performance of Prostate Cancer Prevention Trial Risk Calculator in a Contemporary Cohort Screened for Prostate Cancer and Diagnosed by Extended Prostate Biopsy	2009	Carvell T. Nguyen Changhong Yu Ayman Moussa Michael W. Kattan J. Stephen Jones	1
+ PDF Chat	Confounding and Collapsibility in Causal Inference	1999	Sander Greenland Judea Pearl James M. Robins	1
+ PDF Chat	Adjusting for Heritable Covariates Can Bias Effect Estimates in Genome-Wide Association Studies	2015	Hugues Aschard Bjarni J. Vilhjálmsson Amit D. Joshi Alkes L. Price Peter Kraft	1
+ PDF Chat	The Effect of Universal Influenza Immunization on Mortality and Health Care Use	2008	Jeffrey C. Kwong Thérèse A. Stukel Jenny Lim Allison McGeer Ross Upshur Helen Johansen Christie Sambell W. Thompson Deva Thiruchelvam Fawziah Marra	1
+	Automated covariate selection and Bayesian model averaging in population PK/PD models	2007	David J. Lunn	1
+	Power and Sample Size Calculations for Case-Control Studies of Gene-Environment Interactions with a Polytomous Exposure Variable	1997	Ivo Foppa Donna Spiegelman	1
+	Causality: a Statistical View	2004	David R. Cox Nanny Wermuth	1
+ PDF Chat	Genotype-Based Risk and Pharmacogenetic Sampling in Clinical Trials	2010	Nicholas J. Schork Eric J. Topol	1
+	Independence properties of directed markov fields	1990	Steffen L. Lauritzen A. P. Dawid Bayley Larsen Hanns-Georg Leimer	1
+ PDF Chat	The Distribution of the Instrumental Variables Estimator and Its $t$-Ratio When the Instrument is a Poor One	1990	Charles R. Nelson Richard Startz	1
+ PDF Chat	Use of Mendelian randomisation to assess potential benefit of clinical intervention	2012	Stephen Burgess Adam S. Butterworth Anders Mälarstig Simon G. Thompson	1
+	Stochastic Relaxation, Gibbs Distributions, and the Bayesian Restoration of Images	1984	Stuart Geman Donald Geman	1
+	Bayesian Detection of Clusters and Discontinuities in Disease Maps	2000	Leonhard Knorr‐Held Günter Raßer	1
+	Instrumental variables when evaluating screening trials: estimating the benefit of detecting cancer by screening	1999	Martin McIntosh	1
+ PDF Chat	Population-Based Reversible Jump Markov Chain Monte Carlo	2007	Ajay Jasra David A. Stephens Chris Holmes	1
+	A Structural Approach to Selection Bias	2004	Miguel A. Hernán Sonia Hernández–Dı́az James M. Robins	1
+	Randomization, Statistics, and Causal Inference	1990	Sander Greenland	1
+ PDF Chat	Complexity and Power in Case-Control Association Studies	2001	Jeff Longmate	1
+ PDF Chat	Instrumental Variable Analysis with a Nonlinear Exposure–Outcome Relationship	2014	Stephen Burgess Neil M Davies Simon G. Thompson	1
+	Bayesian auxiliary variable models for binary and multinomial regression	2006	Leonhard Held Chris Holmes	1
+ PDF Chat	Bayesian Model Averaging for Linear Regression Models	1997	Adrian E. Raftery David Madigan Jennifer A. Hoeting	1
+ PDF Chat	Bayesian Measures of Model Complexity and Fit	2002	David J. Spiegelhalter Nicola Best Bradley P. Carlin Angelika van der Linde	1
+	The Efficacy of Influenza Vaccination in Elderly Individuals	1994	Th. M. E. Govaert	1
+	Transdimensional Markov Chains	2005	Scott A. Sisson	1
+	Individual Therapy: New Dawn or False Dawn?	2001	Stephen Senn	1
+ PDF Chat	Bayesian Test for Colocalisation between Pairs of Genetic Association Studies Using Summary Statistics	2014	Claudia Giambartolomei Damjan Vukcevic Eric E. Schadt Lude Franke Aroon D. Hingorani Chris Wallace Vincent Plagnol	1
+ PDF Chat	Improving the acceptance rate of reversible jump MCMC proposals	2004	Fahimah Al-Awadhi Merrilee Hurn Christopher Jennison	1
+	Testing Identifiability and Specification in Instrumental Variable Models	1993	John G. Cragg Stephen G. Donald	1
+	Sampling-Based Approaches to Calculating Marginal Densities	1990	Alan E. Gelfand A. F. M. Smith	1
+	Testing the Statistical Certainty of a Response to Increasing Doses of a Drug	1985	John W. Tukey Joseph L. Ciminera Joseph F. Heyse	1
+ PDF Chat	General Methods for Monitoring Convergence of Iterative Simulations	1998	Stephen P. Brooks Andrew Gelman	1
+ PDF Chat	Estimates of US influenza‐associated deaths made using four different methods	2009	W. Thompson Eric Weintraub Praveen Dhankhar Po‐Yung Cheng Lynnette Brammer Martin I. Meltzer Joseph S. Bresee David K. Shay	1
+	On Bayesian Analysis of Mixtures with an Unknown Number of Components	1997	Sylvia Richardson Peter J. Green	1
+	Trans-dimensional Markov chain Monte Carlo	2003	Peter J. Green	1