Comparing Performance and Portability Between CUDA and SYCL for Protein Database Search on NVIDIA, AMD, and Intel GPUs
Comparing Performance and Portability Between CUDA and SYCL for Protein Database Search on NVIDIA, AMD, and Intel GPUs
The heterogeneous computing paradigm has led to the need for portable and efficient programming solutions that can leverage the capabilities of various hardware devices, such as NVIDIA, Intel, and AMD GPUs. This study evaluates the portability and performance of the SYCL and CUDA languages for one fundamental bioinformatics application (Smith-Waterman …