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Quantifying Topology In Pancreatic Tubular Networks From Live Imaging 3D Microscopy

Quantifying Topology In Pancreatic Tubular Networks From Live Imaging 3D Microscopy

Motivated by the challenging segmentation task of pancreatic tubular networks, this paper tackles two commonly encountered problems in biomedical imaging: Topological consistency of the segmentation, and expensive or difficult annotation. Our contributions are the following: a) We propose a topological score which measures both topological and geometric consistency between the …