Parameterized algorithms for identifying gene co-expression modules via weighted clique decomposition
Parameterized algorithms for identifying gene co-expression modules via weighted clique decomposition
We present a new combinatorial model for identifying regulatory modules in gene co-expression data using a decomposition into weighted cliques. To capture complex interaction effects, we generalize the previously-studied weighted edge clique partition problem. As a first step, we restrict ourselves to the noise-free setting, and show that the problem …