Nicholas P. Tatonetti

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All published works

Action	Title	Year	Authors
+ PDF Chat	Vision-Language and Large Language Model Performance in Gastroenterology: GPT, Claude, Llama, Phi, Mistral, Gemma, and Quantized Models	2024	Seyed Amir Ahmad Safavi-Naini Shuhaib Ali Omer Shahab Zahra Shahhoseini Thomas Savage Sara Rafiee Jamil S. Samaan Reem Al Shabeeb Farah Ladak Jamie O. Yang
+ PDF Chat	Estimating the heritability of SARS-CoV-2 susceptibility and COVID-19 severity	2024	Kathleen LaRow Brown Vijendra Ramlall Michael Zietz Undina Gisladottir Nicholas P. Tatonetti
+ PDF Chat	Using machine learning probabilities to identify effects of COVID-19	2023	Vijendra Ramlall Undina Gisladottir Jenna Kefeli Yutaro Tanaka Benjamin May Nicholas P. Tatonetti
+	Large Language Models for Granularized Barrett's Esophagus Diagnosis Classification	2023	Jenna Kefeli Ali Soroush Courtney Diamond Haley M. Zylberberg Benjamin May Julian A. Abrams Chunhua Weng Nicholas P. Tatonetti
+ PDF Chat	Evaluating risk detection methods to uncover ontogenic-mediated adverse drug effect mechanisms in children	2021	Nicholas Giangreco Nicholas P. Tatonetti
+ PDF Chat	A database of pediatric drug effects to evaluate ontogenic mechanisms from child growth and development	2021	Nicholas Giangreco Nicholas P. Tatonetti
+ PDF Chat	Evaluating risk detection methods to uncover ontogenic-mediated adverse drug effect mechanisms in children	2021	Nicholas Giangreco Nicholas P. Tatonetti
+ PDF Chat	Simulating drug effects on blood glucose laboratory test time series with a conditional WGAN	2020	Alexandre Yahi Nicholas P. Tatonetti
+ PDF Chat	The Next Generation of Drug Safety Science: Coupling Detection, Corroboration, and Validation to Discover Novel Drug Effects and Drug–Drug Interactions	2018	Nicholas P. Tatonetti
+	Lifetime dataset: paired-concept deviations	2018	Casey Ta Michel Dumontier George Hripcsak Nicholas P. Tatonetti Chunhua Weng
+	Lifetime dataset: single concept deviations	2018	Casey Ta Michel Dumontier George Hripcsak Nicholas P. Tatonetti Chunhua Weng
+	Generative Adversarial Networks for Electronic Health Records: A Framework for Exploring and Evaluating Methods for Predicting Drug-Induced Laboratory Test Trajectories	2017	Alexandre Yahi R. Vanguri Noémie Elhadad Nicholas P. Tatonetti
+ PDF Chat	A curated and standardized adverse drug event resource to accelerate drug safety research	2016	Juan M. Banda Lee Evans R. Vanguri Nicholas P. Tatonetti Patrick Ryan Nigam H. Shah
+ PDF Chat	Stimulated Reporting: The Impact of US Food and Drug Administration-Issued Alerts on the Adverse Event Reporting System (FAERS)	2014	Keith B. Hoffman A. Demakas Mo Dimbil Nicholas P. Tatonetti Colin B. Erdman
+ PDF Chat	The Weber Effect and the United States Food and Drug Administration’s Adverse Event Reporting System (FAERS): Analysis of Sixty-Two Drugs Approved from 2006 to 2010	2014	Keith B. Hoffman Mo Dimbil Colin B. Erdman Nicholas P. Tatonetti Brian M. Overstreet
+ PDF Chat	Genetic variants associated with warfarin dose in African-American individuals: a genome-wide association study	2013	Minoli A. Perera Larisa H. Cavallari Nita A. Limdi Eric R. Gamazon Anuar Konkashbaev Roxana Daneshjou Anna Pluzhnikov Dana C. Crawford Jelai Wang Nianjun Liu
+ PDF Chat	Response to 'Use of an algorithm for identifying hidden drug--drug interactions in adverse event reports' by Gooden et al	2013	Nicholas P. Tatonetti Joshua C. Denny Russ B. Altman
+ PDF Chat	Detecting Drug Interactions From Adverse-Event Reports: Interaction Between Paroxetine and Pravastatin Increases Blood Glucose Levels	2011	Nicholas P. Tatonetti Joshua C. Denny S. Murphy G H Fernald G. Krishnan Vı́ctor Castro Patrick Yue P S Tsau Isaac S. Kohane D M Roden

Common Coauthors

Coauthor	Papers Together
Nicholas Giangreco	3
Russ B. Altman	3
Chunhua Weng	3
Ali Soroush	2
Benjamin May	2
Casey Ta	2
George Hripcsak	2
Undina Gisladottir	2
R. Vanguri	2
Alexandre Yahi	2
Vijendra Ramlall	2
Jenna Kefeli	2
Keith B. Hoffman	2
Colin B. Erdman	2
Mo Dimbil	2
Joshua C. Denny	2
Michel Dumontier	2
Bara El Kurdi	1
Yukiko Bradford	1
Nancy J. Cox	1
Michael Zietz	1
Dana C. Crawford	1
Nigam H. Shah	1
Matthew T. Oetjens	1
Steven A. Lubitz	1
Noémie Elhadad	1
Girish N. Nadkarni	1
Mark J. Rieder	1
Jamil S. Samaan	1
Farah Ladak	1
Vı́ctor Castro	1
Haley M. Zylberberg	1
Stuart A. Scott	1
Dan M. Roden	1
Anna Pluzhnikov	1
Taimour Langaee	1
A. Demakas	1
Harumi Takahashi	1
Patrick Ryan	1
Nianjun Liu	1
Larisa H. Cavallari	1
Michiaki Kubo	1
Jamie O. Yang	1
Julian A. Abrams	1
Courtney Diamond	1
G H Fernald	1
Benjamin Burkley	1
Shitalben R. Patel	1
Alan H.B. Wu	1
Teri E. Klein	1

Commonly Cited References

Action	Title	Year	Authors	# of times referenced
+ PDF Chat	Detecting Drug Interactions From Adverse-Event Reports: Interaction Between Paroxetine and Pravastatin Increases Blood Glucose Levels	2011	Nicholas P. Tatonetti Joshua C. Denny S. Murphy G H Fernald G. Krishnan Vı́ctor Castro Patrick Yue P S Tsau Isaac S. Kohane D M Roden	3
+	Generalized Additive Models: An Introduction with R, Second Edition	2017	Simon N. Wood	3
+	Use of proportional reporting ratios (PRRs) for signal generation from spontaneous adverse drug reaction reports	2001	Stephen Evans Patrick Waller Sarah Davis	3
+	Generalized additive models for medical research	1995	Trevor Hastie Robert Tibshirani	3
+ PDF Chat	Identifying the “Blip on the Radar Screen”: Leveraging Big Data in Defining Drug Safety and Efficacy in Pediatric Practice	2018	Michael L. Christensen Robert L. Davis	3
+ PDF Chat	Regression with Ordered Predictors via Ordinal Smoothing Splines	2017	Nathaniel E. Helwig	2
+	Penalising Model Component Complexity: A Principled, Practical Approach to Constructing Priors	2017	Daniel Simpson Håvard Rue Andrea Riebler Thiago G. Martins Sigrunn H. Sørbye	2
+	Regulatory Innovation in Postmarketing Risk Assessment and Management	2012	Judy A. Staffa Gerald J. Dal Pan	2
+ PDF Chat	Beyond the Randomized Clinical Trial: Innovative Data Science to Close the Pediatric Evidence Gap	2019	Sebastiaan C. Goulooze Laura B. Zwep Julia E. Vogt Elke H. J. Krekels Thomas Hankemeier John N. van den Anker Catherijne A. J. Knibbe	2
+	Adverse drug event monitoring at the food and drug administration	2003	Syed Rizwanuddin Ahmad	2
+ PDF Chat	The Elements of Statistical Learning	2009	Trevor Hastie Robert Tibshirani Jerome H. Friedman	2
+	Advancing the Science for Active Surveillance: Rationale and Design for the Observational Medical Outcomes Partnership	2010	Paul Stang Patrick Ryan Judith A. Racoosin J. Marc Overhage Abraham G. Hartzema Christian Reich Emily Welebob Thomas Scarnecchia Janet Woodcock	2
+ PDF Chat	Interpreting observational studies: why empirical calibration is needed to correct <i>p</i>‐values	2013	Martijn J. Schuemie Patrick Ryan William DuMouchel Marc A. Suchard David Madigan	2
+	A Surveillance Method for the Early Identification of Idiosyncratic Adverse Drug Reactions	2008	Fatma Etwel Michael J. Rieder John R. Bend Gideon Koren	2
+	Generating Multi-label Discrete Patient Records using Generative Adversarial Networks	2017	Edward Choi Siddharth Biswal Bradley Malin Jon Duke Walter F. Stewart Jimeng Sun	2
+	Real-valued (Medical) Time Series Generation with Recurrent Conditional GANs	2017	Cristóbal Esteban Stephanie L. Hyland Gunnar Rätsch	2
+	Conditional Generative Adversarial Nets	2014	Mehdi Mirza Simon Osindero	1
+ PDF Chat	Warfarin pharmacogenetics: a single VKORC1 polymorphism is predictive of dose across 3 racial groups	2010	Nita A. Limdi Mia Wadelius Larisa H. Cavallari Niclas Eriksson Dana C. Crawford Ming Ta Michael Lee Chien‐Hsiun Chen Alison A. Motsinger‐Reif Hersh Sagreiya Nianjun Liu	1
+ PDF Chat	Genotype-Guided Dosing of Coumarin Derivatives: The European Pharmacogenetics of Anticoagulant Therapy (EU-PACT) Trial Design	2009	Rianne MF van Schie Mia Wadelius Farhad Kamali Ann K. Daly Vangelis G. Manolopoulos Anthonius de Boer Rita Barallon Talitha I. Verhoef Julia Kirchheiner Elisabeth Haschke‐Becher	1
+ PDF Chat	Linear Smoothers and Additive Models	1989	Andreas Buja Trevor Hastie Robert Tibshirani	1
+ PDF Chat	Annotation Analysis for Testing Drug Safety Signals using Unstructured Clinical Notes	2012	Paea LePendu Srinivasan Iyer Cédrick Fairon Nigam H. Shah	1
+	Temporal Convolutional Neural Networks for Diagnosis from Lab Tests	2015	Narges Razavian David Sontag	1
+ PDF Chat	Rethinking the Inception Architecture for Computer Vision	2016	Christian Szegedy Vincent Vanhoucke Sergey Ioffe Jon Shlens Zbigniew Wojna	1
+ PDF Chat	From Facial Parts Responses to Face Detection: A Deep Learning Approach	2015	Shuo Yang Ping Luo Chen Change Loy Xiaoou Tang	1
+	Deep multi-scale video prediction beyond mean square error	2015	Michaël Mathieu Camille Couprie Yann LeCun	1
+	Interactions Between the Clinical Laboratory and Clinical Pharmacologists to Optimize Drug Therapy	1990	Michael R. Vasko	1
+	Integral Probability Metrics and Their Generating Classes of Functions	1997	Alfred Müller	1
+ PDF Chat	Characterizing treatment pathways at scale using the OHDSI network	2016	George Hripcsak Patrick Ryan Jon Duke Nigam H. Shah Rae Woong Park Vojtech Huser Marc A. Suchard Martijn J. Schuemie Frank DeFalco Adler Perotte	1
+	Adversarially Learned Inference	2016	Vincent Dumoulin Ishmael Belghazi Ben Poole Olivier Mastropietro Alex Lamb Martín Arjovsky Aaron Courville	1
+ PDF Chat	Generalized Additive Models for Gigadata: Modeling the U.K. Black Smoke Network Daily Data	2016	Simon N. Wood Zheyuan Li Gavin Shaddick Nicole H. Augustin	1
+ PDF Chat	Robust empirical calibration of <i>p</i>‐values using observational data	2016	Martijn J. Schuemie George Hripcsak Patrick Ryan David Madigan Marc A. Suchard	1
+	Image-to-Image Translation with Conditional Adversarial Networks	2016	Phillip Isola Jun-Yan Zhu Tinghui Zhou Alexei A. Efros	1
+	StackGAN: Text to Photo-realistic Image Synthesis with Stacked Generative Adversarial Networks	2016	Han Zhang Tao Xu Hongsheng Li Shaoting Zhang Xiaogang Wang Xiaolei Huang Dimitris Metaxas	1
+	MidiNet: A Convolutional Generative Adversarial Network for Symbolic-domain Music Generation	2017	Li-Chia Yang Szu-Yu Chou Yi‐Hsuan Yang	1
+	On the regularization of Wasserstein GANs	2017	Henning Petzka Asja Fischer Denis Lukovnicov	1
+	Pros and Cons of GAN Evaluation Measures	2018	Ali Borji	1
+	Empirical confidence interval calibration for population-level effect estimation studies in observational healthcare data	2018	Martijn J. Schuemie George Hripcsak Patrick Ryan David Madigan Marc A. Suchard	1
+	Fréchet ChemblNet Distance: A metric for generative models for molecules.	2018	Kristina Preuer Philipp Renz Thomas Unterthiner Sepp Hochreiter Günter Klambauer	1
+	A systematic approach to improving the reliability and scale of evidence from health care data	2018	Martijn J. Schuemie Patrick Ryan George Hripcsak David Madigan Marc A. Suchard	1
+ PDF Chat	Natural language generation for electronic health records	2018	Scott Lee	1
+	Generating Videos with Scene Dynamics	2016	Carl Vondrick Hamed Pirsiavash Antonio Torralba	1
+	Generative Adversarial Text to Image Synthesis	2016	Scott Reed Zeynep Akata Xinchen Yan Lajanugen Logeswaran Bernt Schiele Honglak Lee	1
+	Adversarial Variational Bayes: Unifying Variational Autoencoders and Generative Adversarial Networks	2017	Lars Mescheder Sebastian Nowozin Andreas Geiger	1
+	Improved Techniques for Training GANs	2016	Tim Salimans Ian Goodfellow Wojciech Zaremba Vicki Cheung Alec Radford Xi Chen	1
+	f-GAN: Training Generative Neural Samplers using Variational Divergence Minimization	2016	Sebastian Nowozin Botond Cseke Ryota Tomioka	1
+	GANs Trained by a Two Time-Scale Update Rule Converge to a Local Nash Equilibrium	2017	Martin Heusel Hubert Ramsauer Thomas Unterthiner Bernhard Nessler Sepp Hochreiter	1
+ PDF Chat	Recurrent Neural Networks for Multivariate Time Series with Missing Values	2018	Zhengping Che Sanjay Purushotham Kyunghyun Cho David Sontag Yan Liu	1
+	Towards Principled Methods for Training Generative Adversarial Networks	2017	Martín Arjovsky Léon Bottou	1
+	COVID-19: Epidemiology, Evolution, and Cross-Disciplinary Perspectives	2020	Jiumeng Sun Wan-Ting He Lifang Wang Alexander Lai Xiang Ji Xiaofeng Zhai Gairu Li Marc A. Suchard Jin Tian Jiyong Zhou	1
+ PDF Chat	Collider bias undermines our understanding of COVID-19 disease risk and severity	2020	Gareth J Griffith Tim Morris Matthew Tudball Annie Herbert Giulia Mancano Lindsey Pike Gemma C. Sharp Jonathan A C Sterne Tom Palmer George Davey Smith	1