David J. Galas

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All published works

Action	Title	Year	Authors
+ PDF Chat	Optimized permutation testing for information theoretic measures of multi-gene interactions	2021	James Kunert-Graf Nikita A. Sakhanenko David J. Galas
+	The Group Theoretic Roots of Information I: permutations, symmetry, and entropy.	2019	David J. Galas
+	The Group Theoretic Roots of Information: permutations, symmetry, and entropy	2019	David J. Galas
+ PDF Chat	Multivariate Analysis of Data Sets with Missing Values: An Information Theory-Based Reliability Function	2018	Lisa Uechi David J. Galas Nikita A. Sakhanenko
+ PDF Chat	Expansion of the Kullback-Leibler Divergence, and a New Class of Information Metrics	2017	David J. Galas Gregory Dewey James Kunert-Graf Nikita A. Sakhanenko
+	Expansion of the Kullback-Leibler Divergence, and a new class of information metrics	2017	David J. Galas T. Gregory Dewey James Kunert-Graf Nikita A. Sakhanenko
+	Expansion of the Kullback-Leibler Divergence, and a new class of information metrics	2017	David J. Galas T. Gregory Dewey James Kunert-Graf Nikita A. Sakhanenko
+ PDF Chat	A genome wide dosage suppressor network reveals genomic robustness	2016	Biranchi N. Patra Yoshiko Kon Gitanjali Yadav Anthony Sevold Jesse Frumkin Ravishankar R. Vallabhajosyula Arend Hintze Bjørn Østman Jory Schossau Ashish Bhan
+	Unifying formalism for multivariate information-related measures: Möbius operators on subset lattices.	2016	David J. Galas Nikita A. Sakhanenko
+	Multivariate information measures: a unification using Möbius operators on subset lattices	2016	David J. Galas Nikita A. Sakhanenko
+	Multivariate information measures: a unification using Möbius operators on subset lattices	2016	David J. Galas Nikita A. Sakhanenko
+ PDF Chat	Describing the Complexity of Systems: Multivariable “Set Complexity” and the Information Basis of Systems Biology	2013	David J. Galas Nikita A. Sakhanenko Alexander Skupin Tomasz Ignac
+ PDF Chat	A genome wide dosage suppressor network reveals genetic robustness and a novel mechanism for Huntingtons disease	2013	Biranchi N. Patra Yoshiko Kon Gitanjali Yadav Anthony Sevold Jesse Frumkin Ravishankar R. Vallabhajosyula Arend Hintze Bjørn Østman Jory Schossau Ashish Bhan
+	Describing the complexity of systems: multi-variable "set complexity" and the information basis of systems biology	2013	David J. Galas Nikita A. Sakhanenko Alexander Skupin Tomasz Ignac
+	Describing the complexity of systems: Multi-variable "set complexity" and hypergraphs	2013	David J. Galas Nikita A. Sakhanenko Alexander Skupin Tomasz Ignac
+	On Lattices and the Dualities of Information Measures	2013	David J. Galas Nikita A. Sakhanenko Benjamin J. Keller
+	Describing the complexity of systems: multi-variable "set complexity" and the information basis of systems biology	2013	David J. Galas Nikita A. Sakhanenko Alexander Skupin Tomasz Ignac
+ PDF Chat	RNASEQR—a streamlined and accurate RNA-seq sequence analysis program	2011	Leslie Y. Chen Kuo‐Chen Wei Abner C. Y. Huang Kai Wang Chiung-Yin Huang Danielle Yi Chuan Yi Tang David J. Galas Leroy Hood
+	RNASEQR - A streamlined and accurate RNA-seq sequence analysis program	2011	Abner C. Y. Huang Leslie Y. Chen Kuo‐Chen Wei Kai Wang Chiung-Yin Huang Danielle Yi Chuan Yi Tang David J. Galas Leroy Hood
+	RNASEQR - A streamlined and accurate RNA-seq sequence analysis program	2011	Abner C. -Y. Huang Leslie Y. Chen Kuo‐Chen Wei Kai Wang Chiung-Yin Huang Danielle Yi Chuan Yi Tang David J. Galas Leroy Hood
+	The Hallmarks of Cancer Revisited Through Systems Biology and Network Modelling	2011	Charles Auffray Trey Ideker David J. Galas Leroy Hood
+ PDF Chat	Markov Logic Networks in the Analysis of Genetic Data	2010	Nikita A. Sakhanenko David J. Galas
+	Markov Logic Networks in the Analysis of Genetic Data	2010	Nikita A. Sakhanenko David J. Galas
+	Markov Logic Networks in the Analysis of Genetic Data	2010	Nikita A. Sakhanenko David J. Galas
+	Set-based complexity and biological information	2008	David J. Galas Matti Nykter Gregory W. Carter Nathan D. Price Ilya Shmulevich
+ PDF Chat	Cancer as robust intrinsic state of endogenous molecular-cellular network shaped by evolution	2007	Ping Ao David J. Galas Leroy Hood Xiaomei Zhu
+	Cancer Genesis and Progression as Dynamics in Functional Landscape of Endogenous Molecular-Cellular Network	2007	Ping Ao David J. Galas Leroy Hood Xiaomei Zhu
+	Efficiency, Robustness and Stochasticity of Gene Regulatory Networks in Systems Biology: lambda Switch as a Working Example	2005	Xiaomei Zhu Lan Yin Leroy Hood David J. Galas Ping Ao
+ PDF Chat	Duplication Models for Biological Networks	2003	Fan Chung Linyuan Lü T. Gregory Dewey David J. Galas
+	Duplication Models for Biological Networks	2002	Fan Chung Linyuan Lü T. Gregory Dewey David J. Galas
+	A computable expansion for multiparticle propagators	1973	David J. Galas C. A. Jensen H.L. Sahlin

Common Coauthors

Coauthor	Papers Together
Nikita A. Sakhanenko	16
Leroy Hood	7
James Kunert-Graf	4
Tomasz Ignac	4
Alexander Skupin	4
Xiaomei Zhu	3
Chiung-Yin Huang	3
Ping Ao	3
Danielle Yi	3
Kuo‐Chen Wei	3
Kai Wang	3
Leslie Y. Chen	3
T. Gregory Dewey	3
Chuan Yi Tang	3
Gitanjali Yadav	2
Anthony Sevold	2
Elizabeth J. Grayhack	2
Jenna Tamashiro	2
Arend Hintze	2
Alpan Raval	2
Ashish Bhan	2
Animesh Ray	2
Eric M. Phizicky	2
Jory Schossau	2
Yoshiko Kon	2
Bjørn Østman	2
Abner C. Y. Huang	2
Biranchi N. Patra	2
Nitin S. Baliga	2
Christoph Adami	2
Jesse Frumkin	2
Linyuan Lü	2
Bruz Marzolf	2
Ravishankar R. Vallabhajosyula	2
Amardeep Kaur	2
Fan Chung	2
Charles Auffray	1
Benjamin J. Keller	1
T. Gregory Dewey	1
Lan Yin	1
C. A. Jensen	1
Trey Ideker	1
Nathan D. Price	1
Gregory Dewey	1
Abner C. -Y. Huang	1
Gregory W. Carter	1
Ilya Shmulevich	1
Matti Nykter	1
H.L. Sahlin	1
Lisa Uechi	1

Commonly Cited References

Action	Title	Year	Authors	# of times referenced
+ PDF Chat	Describing the Complexity of Systems: Multivariable “Set Complexity” and the Information Basis of Systems Biology	2013	David J. Galas Nikita A. Sakhanenko Alexander Skupin Tomasz Ignac	4
+	Multivariate information transmission	1954	W. J. McGill	3
+	Multivariate information transmission	1954	W. J. McGill	3
+ PDF Chat	The yeast cell-cycle network is robustly designed	2004	Fangting Li Tao Long Ying Lu Qi Ouyang Chao Tang	3
+ PDF Chat	Evolution of Complex Modular Biological Networks	2008	Arend Hintze Christoph Adami	2
+ PDF Chat	Algorithmic statistics	2001	Péter Gács John Tromp Paul Vitányi	2
+	Optimal transition paths of stochastic chemical kinetic systems	2006	Di Liu	2
+ PDF Chat	Lethality and centrality in protein networks	2001	Hawoong Jeong S. P. Mason Albert‐László Barabási Zoltán N. Oltvai	2
+ PDF Chat	Finding and evaluating community structure in networks	2004	Michelle G. Newman Michelle Girvan	2
+	Fonctions de répartition à N dimensions et leurs marges	1959	Michael Sklar	2
+ PDF Chat	Causal inference in statistics: An overview	2009	Judea Pearl	2
+ PDF Chat	Emergence of Scaling in Random Networks	1999	Albert‐László Barabási Réka Albert	2
+	A Set of Measures of Centrality Based on Betweenness	1977	Linton C. Freeman	2
+	The road to modularity	2007	Günter P. Wagner Mihaela Pavličev James M. Cheverud	2
+ PDF Chat	Existence and construction of dynamical potential in nonequilibrium processes without detailed balance	2006	Lan Yin Ping Ao	2
+ PDF Chat	Modularity and anti-modularity in networks with arbitrary degree distribution	2010	Arend Hintze Christoph Adami	2
+ PDF Chat	Distribution of mutual information from complete and incomplete data	2004	Marcus Hütter Marco Zaffalon	2
+	The Mathematics of Causal Relations	2011	Judea Pearl	2
+ PDF Chat	Cancer as robust intrinsic state of endogenous molecular-cellular network shaped by evolution	2007	Ping Ao David J. Galas Leroy Hood Xiaomei Zhu	2
+ PDF Chat	Potential in stochastic differential equations: novel construction	2004	Ping Ao	2
+ PDF Chat	Inducing features of random fields	1997	S. Della Pietra V. Della Pietra John Lafferty	2
+ PDF Chat	Functional cartography of complex metabolic networks	2005	Roger Guimerà Luı́s A. Nunes Amaral	2
+ PDF Chat	Optimal path to epigenetic switching	2005	David Marin Roma Ruadhan A. O’Flanagan Andrei E. Ruckenstein Anirvan M. Sengupta Ranjan Mukhopadhyay	2
+ PDF Chat	Structure of stochastic dynamics near fixed points	2005	Chulan Kwon Ping Ao D. J. Thouless	2
+	The information bottleneck method	2000	Naftali Tishby Fernando C. N. Pereira William Bialek	2
+ PDF Chat	Bayesian Copulae Distributions, with Application to Operational Risk Management—Some Comments	2011	Philipp Arbenz	2
+ PDF Chat	Maximum Entropy on Compact Groups	2009	Peter Harremoës	1
+ PDF Chat	Dynamical Foundations of Nonextensive Statistical Mechanics	2001	Christian Beck	1
+ PDF Chat	Random Networks of Automata: A Simple Annealed Approximation	1986	Bernard Derrida Yves Pomeau	1
+	The definition of random sequences	1966	Per Martin-Löf	1
+ PDF Chat	Generalized entropies from first principles	2001	M. P. Almeida	1
+ PDF Chat	Some asymptotic properties of duplication graphs	2003	Alpan Raval	1
+	Integrative mathematical oncology	2008	Alexander R.A. Anderson Vito Quaranta	1
+ PDF Chat	Duplication-divergence model of protein interaction network	2005	Yaroslav Ispolatov P. L. Krapivsky Anton Yuryev	1
+ PDF Chat	Group entropies, correlation laws, and zeta functions	2011	Piergiulio Tempesta	1
+ PDF Chat	Scale-free networks from self-organization	2005	Tim Evans Jari Saramäki	1
+ PDF Chat	A random graph model for massive graphs	2000	William Aiello Fan Chung Linyuan Lü	1
+	Tumor Morphology and Phenotypic Evolution Driven by Selective Pressure from the Microenvironment	2006	Alexander R.A. Anderson Alissa M. Weaver Peter T. Cummings Vito Quaranta	1
+ PDF Chat	Stochastic model of yeast cell-cycle network	2006	Yuping Zhang Minping Qian Qi Ouyang Minghua Deng Fangting Li Chao Tang	1
+ PDF Chat	Sharpening Occam's razor	2003	Ming Li John Tromp Paul Vitányi	1
+	The diameter of random massive graphs	2001	Linyuan Lü	1
+	Mean-field theory for scale-free random networks	1999	Albert‐László Barabási Réka Albert Hawoong Jeong	1
+	MATHEMATICAL MODELING OF TUMOR-INDUCED ANGIOGENESIS	2006	Mark A. J. Chaplain S. R. McDougall Alexander R.A. Anderson	1
+ PDF Chat	Statistical mechanics of complex networks	2002	Réka Albert Albert‐László Barabási	1
+ PDF Chat	Clustering by Compression	2005	Rudi Cilibrasi Paul Vitányi	1
+ PDF Chat	Permutohedra, Associahedra, and Beyond	2009	Alexander Postnikov	1
+ PDF Chat	The Homological Nature of Entropy	2015	Pierre Baudot Daniel Bennequin	1
+ PDF Chat	Sources of Bias in Specimens for Research About Molecular Markers for Cancer	2009	David F. Ransohoff Margaret L. Gourlay	1
+	Interpreting Kullback–Leibler divergence with the Neyman–Pearson lemma	2006	Shinto Eguchi J. B. Copas	1
+	A Multiscale Model for Avascular Tumor Growth	2005	Yi Jiang Jelena Pješivac–Grbović Charles L. Cantrell James P. Freyer	1