John F. Wambaugh

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All published works

Action	Title	Year	Authors
+	Reproducibility of organ-level effects in repeat dose animal studies	2023	Katie Paul Friedman Miran J. Foster Ly Pham Madison Feshuk Sean Watford John F. Wambaugh Richard Judson R. Woodrow Setzer Russell S. Thomas
+	Simulating toxicokinetic variability to identify susceptible and highly exposed populations	2022	Miyuki Breen John F. Wambaugh Amanda Bernstein Mark Sfeir Caroline Ring
+	High-throughput PBTK models for <i>in vitro</i> to <i>in vivo</i> extrapolation	2021	Miyuki Breen Caroline Ring Anna Kreutz Michael‐Rock Goldsmith John F. Wambaugh
+	PBPK model reporting template for chemical risk assessment applications	2020	Yu‐Mei Tan Melissa P. L. Chan Amechi C. Chukwudebe Jeanne Y. Domoradzki Jeffrey W. Fisher C. Eric Hack Paul M. Hinderliter Kota Hirasawa Jeremy A. Leonard Annie Lumen
+ PDF Chat	Assessing Toxicokinetic Uncertainty and Variability in Risk Prioritization	2019	John F. Wambaugh Barbara A. Wetmore Caroline Ring Chantel I. Nicolas Robert G. Pearce Gregory S. Honda Roger Dinallo Derek Angus Jon Gilbert Teresa Sierra
+	Rapid PBPK modeling with the httk model	2018	John F. Wambaugh
+ PDF Chat	In vitro to in vivo extrapolation for high throughput prioritization and decision making	2017	Shannon Bell Xiaoqing Chang John F. Wambaugh David Allen Mike Bartels Kim L. R. Brouwer Warren Casey Neepa Choksi Stephen Ferguson Grazyna Fraczkiewicz
+	Identifiability of PBPK models with applications to dimethylarsinic acid exposure	2015	Ramon I. Garcia Joseph G. Ibrahim John F. Wambaugh Elaina M. Kenyon R. Woodrow Setzer
+ PDF Chat	Incorporating Population Variability and Susceptible Subpopulations into Dosimetry for High-Throughput Toxicity Testing	2014	Barbara A. Wetmore Brittany Allen Harvey J. Clewell Timothy A. Parker John F. Wambaugh Lisa M. Almond Mark A. Sochaski Russell S. Thomas
+ PDF Chat	Relative Impact of Incorporating Pharmacokinetics on Predicting In Vivo Hazard and Mode of Action from High-Throughput In Vitro Toxicity Assays	2013	Barbara A. Wetmore John F. Wambaugh Stephen Ferguson Li‐Li Li Harvey J. Clewell Richard Judson Kimberly Freeman Wenjun Bao Mark A. Sochaski Tzu‐Ming Chu
+ PDF Chat	Physiologically Based Pharmacokinetic Model Use in Risk Assessment—Why Being Published Is Not Enough	2011	Eva D. McLanahan Hisham El‐Masri Lisa Sweeney Leonid Kopylev Harvey J. Clewell John F. Wambaugh Paul M. Schlosser
+	Virtual Tissues in Toxicology	2010	Imran Shah John F. Wambaugh
+ PDF Chat	Force networks and elasticity in granular silos	2010	John F. Wambaugh R. R. Hartley R. P. Behringer
+ PDF Chat	Simulating Microdosimetry in a Virtual Hepatic Lobule	2010	John F. Wambaugh Imran Shah
+	Force networks and elasticity in granular silos	2008	John F. Wambaugh R. R. Hartley Robert Behringer
+ PDF Chat	Response to perturbations for granular flow in a hopper	2007	John F. Wambaugh Robert Behringer John Matthews Pierre A. Gremaud
+	Graph percolation as an analog to granular force networks	2006	John F. Wambaugh
+	Simple models for granular force networks	2006	John F. Wambaugh
+ PDF Chat	Ratchet-induced segregation and transport of nonspherical grains	2002	John F. Wambaugh C. Reichhardt C. J. Olson
+ PDF Chat	Superconducting Fluxon Pumps and Lenses	1999	John F. Wambaugh C. Reichhardt C. J. Olson Fabio Marchesoni Franco Nori

Common Coauthors

Coauthor	Papers Together
Caroline Ring	4
Russell S. Thomas	4
Barbara A. Wetmore	4
R. Woodrow Setzer	3
Harvey J. Clewell	3
Mark A. Sochaski	2
C. Reichhardt	2
Alicia Paini	2
Richard Judson	2
C. J. Olson	2
Robert Behringer	2
Miyuki Breen	2
R. R. Hartley	2
Annie Lumen	2
Imran Shah	2
Brittany Allen	2
Stephen Ferguson	2
Catherine S. Sprankle	1
John Troutman	1
Kota Hirasawa	1
Jon Gilbert	1
Neepa Choksi	1
Elaina M. Kenyon	1
Michael B. Black	1
David Allen	1
Melvin E. Andersen	1
Grazyna Fraczkiewicz	1
Chantel I. Nicolas	1
Yu‐Mei Tan	1
Amanda Bernstein	1
C. Eric Hack	1
Fagen Zhang	1
Gregory S. Honda	1
Judy Strickland	1
Hua Qian	1
Adam Brockman	1
Jeffrey W. Fisher	1
Hisham El‐Masri	1
Kimberly Freeman	1
Scott G. Lynn	1
Xiaoqing Chang	1
Franco Nori	1
Miran J. Foster	1
Shannon Bell	1
Bradley Snodgrass	1
Patricia Ruiz	1
R. P. Behringer	1
Jeremy A. Leonard	1
Alice Ke	1
Robert G. Pearce	1

Commonly Cited References

Action	Title	Year	Authors	# of times referenced
+ PDF Chat	Characterizing Uncertainty and Variability in Physiologically Based Pharmacokinetic Models: State of the Science and Needs for Research and Implementation	2007	Hugh A. Barton Weihsueh A. Chiu R. Woodrow Setzer Melvin E. Andersen A. John Bailer Frédéric Y. Bois Robert S. DeWoskin Sean M. Hays Gunnar Johanson Nancy Lee Jones	6
+ PDF Chat	Incorporating Population Variability and Susceptible Subpopulations into Dosimetry for High-Throughput Toxicity Testing	2014	Barbara A. Wetmore Brittany Allen Harvey J. Clewell Timothy A. Parker John F. Wambaugh Lisa M. Almond Mark A. Sochaski Russell S. Thomas	4
+	Evaluation of physiologically based pharmacokinetic models for use in risk assessment	2007	Weihsueh A. Chiu Hugh A. Barton Robert S. DeWoskin Paul M. Schlosser Chad M. Thompson Babasaheb Sonawane John C. Lipscomb Kannan Krishnan	4
+	Framework for Evaluation of Physiologically‐Based Pharmacokinetic Models for Use in Safety or Risk Assessment	2004	Leona H Clark R. Woodrow Setzer Hugh A. Barton	4
+	Characterization and application of physiologically based pharmacokinetic models in risk assessment	2010	Harrie Buist	3
+ PDF Chat	Physiologically Based Pharmacokinetic Model Use in Risk Assessment—Why Being Published Is Not Enough	2011	Eva D. McLanahan Hisham El‐Masri Lisa Sweeney Leonid Kopylev Harvey J. Clewell John F. Wambaugh Paul M. Schlosser	3
+ PDF Chat	Incorporating Monte Carlo Simulation into Physiologically Based Pharmacokinetic Models Using Advanced Continuous Simulation Language (ACSL): A Computational Method	1996	Russell S. Thomas	2
+	Cutting Edge PBPK Models and Analyses: Providing the Basis for Future Modeling Efforts and Bridges to Emerging Toxicology Paradigms	2012	Jane C. Caldwell Marina V. Evans Kannan Krishnan	2
+	Physiologically Based Pharmacokinetic (PBPK) Modeling and Simulation Approaches: A Systematic Review of Published Models, Applications, and Model Verification	2015	Jennifer E. Sager Jingjing Yu Isabelle Ragueneau‐Majlessi Nina Isoherranen	2
+ PDF Chat	Challenges Associated With Applying Physiologically Based Pharmacokinetic Modeling for Public Health Decision-Making	2018	Yu‐Mei Tan Rachel Rogers Worley Jeremy A. Leonard Jeffrey W. Fisher	2
+ PDF Chat	tcpl: the ToxCast pipeline for high-throughput screening data	2016	Dayne L. Filer Parth Kothiya R. Woodrow Setzer Richard Judson Matthew T. Martin	2
+ PDF Chat	In vitro to in vivo extrapolation for high throughput prioritization and decision making	2017	Shannon Bell Xiaoqing Chang John F. Wambaugh David Allen Mike Bartels Kim L. R. Brouwer Warren Casey Neepa Choksi Stephen Ferguson Grazyna Fraczkiewicz	2
+ PDF Chat	Inference from Iterative Simulation Using Multiple Sequences	1992	Andrew Gelman Donald B. Rubin	2
+	Analysis of PBPK Models for Risk Characterization	1999	Frédéric Y. Bois	2
+	Applications of Physiologically Based Pharmacokinetic (PBPK) Modeling and Simulation During Regulatory Review	2010	Ping Zhao L Zhang Joseph A. Grillo Q. Liu Julie Bullock Young‐Jin Moon Pengfei Song Satjit Brar Rajanikanth Madabushi Ta C. Wu	2
+	Application of Physiologically Based Pharmacokinetic (PBPK) Modeling to Support Dose Selection: Report of an FDA Public Workshop on PBPK	2015	Christian Wagner Ping Zhao Y. Pan Vicky Hsu Joseph A. Grillo S-M Huang Vikram Sinha	2
+	Identifiability of PBPK models with applications to dimethylarsinic acid exposure	2015	Ramon I. Garcia Joseph G. Ibrahim John F. Wambaugh Elaina M. Kenyon R. Woodrow Setzer	2
+	Physiologically-Based Pharmacokinetics in Drug Development and Regulatory Science	2011	Malcolm Rowland Carl C. Peck Geoffrey T. Tucker	2
+ PDF Chat	Cooperative Transport of Brownian Particles	1995	Imre Derényi Tamás Vicsek	2
+	High-throughput PBTK models for <i>in vitro</i> to <i>in vivo</i> extrapolation	2021	Miyuki Breen Caroline Ring Anna Kreutz Michael‐Rock Goldsmith John F. Wambaugh	2
+ PDF Chat	Incorporating Monte Carlo Simulation into Physiologically Based Pharmacokinetic Models Using Advanced Continuous Simulation Language (ACSL): A Computational Method	1996	Russell S. Thomas WILLIAM E. LYTLE THOMAS J. KEEFE ALEXANDER A. CONSTAN Raymond S. H. Yang	2
+ PDF Chat	Assessing Toxicokinetic Uncertainty and Variability in Risk Prioritization	2019	John F. Wambaugh Barbara A. Wetmore Caroline Ring Chantel I. Nicolas Robert G. Pearce Gregory S. Honda Roger Dinallo Derek Angus Jon Gilbert Teresa Sierra	2
+	Statistical Issues in Toxicokinetic Modeling: A Bayesian Perspective	2000	Pascale Bernillon Frédéric Y. Bois	2
+ PDF Chat	Influence of shape on ordering of granular systems in two dimensions	2001	Ivan Rankenburg R. J. Zieve	1
+ PDF Chat	Granular packings with moving side walls	2004	James W. Landry Gary S. Grest	1
+	A Re-evaluation and Validation of Ontogeny Functions for Cytochrome P450 1A2 and 3A4 Based on In Vivo Data	2014	Farzaneh Salem Trevor N. Johnson Khaled Abduljalil Geoffrey T. Tucker Amin Rostami‐Hodjegan	1
+ PDF Chat	Evaluating the Accuracy of Sampling-Based Approaches to the Calculation of Posterior Moments	1992	John Geweke	1
+ PDF Chat	Jamming, Force Chains, and Fragile Matter	1998	M. E. Cates Joachim Wittmer Jean‐Philippe Bouchaud Philippe Claudin	1
+ PDF Chat	Spontaneous stratification in granular mixtures	1997	Hernán A. Makse Shlomo Havlin Peter R. King H. Eugene Stanley	1
+	Identifiability, Improper Priors, and Gibbs Sampling for Generalized Linear Models	1999	Alan E. Gelfand Sujit K. Sahu	1
+	Markov Chain Monte Carlo in Practice: A Roundtable Discussion	1998	Robert E. Kass Bradley P. Carlin Andrew Gelman Radford M. Neal	1
+ PDF Chat	Green’s function measurements of force transmission in 2D granular materials	2003	Junfei Geng G. Reydellet Éric Clément Robert Behringer	1
+ PDF Chat	Phase Locking, Devil's Staircases, Farey Trees, and Arnold Tongues in Driven Vortex Lattices with Periodic Pinning	1999	C. Reichhardt Franco Nori	1
+ PDF Chat	Intermittently Flowing Rivers of Magnetic Flux	1996	Franco Nori	1
+ PDF Chat	Models of stress fluctuations in granular media	1998	Philippe Claudin Jean‐Philippe Bouchaud M. E. Cates J. P. Wittmer	1
+ PDF Chat	Confined granular packings: Structure, stress, and forces	2003	James W. Landry Gary S. Grest Leonardo E. Silbert Steven J. Plimpton	1
+	The Epitheliome Project: Multiscale Agent-Based Modeling of Epithelial Cells	2006	R. H. Smallwood Mike Holcombe	1
+ PDF Chat	Biokinetics in repeated-dosing in vitro drug toxicity studies	2015	Nynke I. Kramer Emma Di Consiglio Bas J. Blaauboer Emanuela Testai	1
+ PDF Chat	Segregation Transitions in Wet Granular Matter	2000	Azadeh Samadani Arshad Kudrolli	1
+ PDF Chat	Spatiotemporal dynamics and plastic flow of vortices in superconductors with periodic arrays of pinning sites	1996	C. Reichhardt J. Groth C. J. Olson Stuart B. Field Franco Nori	1
+ PDF Chat	Fractal Networks, Braiding Channels, and Voltage Noise in Intermittently Flowing Rivers of Quantized Magnetic Flux	1998	C. J. Olson C. Reichhardt Franco Nori	1
+ PDF Chat	Stresses in Silos: Comparison Between Theoretical Models and New Experiments	2000	Loïc Vanel Ph. Claudin Jean‐Philippe Bouchaud M. E. Cates Éric Clément J. P. Wittmer	1
+	Development of new technique for risk assessment using physiologically based toxicokinetic models	1999	Gunnar Johanson Fredrik Jönsson Frédéric Y. Bois	1
+	Stochastic Relaxation, Gibbs Distributions, and the Bayesian Restoration of Images	1984	Stuart Geman Donald Geman	1
+ PDF Chat	Ratchet Effect in Surface Electromigration: Smoothing Surfaces by an ac Field	1998	Imre Derényi Choongseop Lee Albert‐László Barabási	1
+	PopGen: A virtual human population generator	2013	Kevin McNally Richard Cotton Alex Hogg George Loizou	1
+ PDF Chat	Nonequilibrium Dynamic Phase Diagram for Vortex Lattices	1998	C. J. Olson C. Reichhardt Franco Nori	1
+ PDF Chat	Elastic medium confined in a column versus the Janssen experiment	2005	Guillaume Ovarlez Éric Clément	1
+ PDF Chat	Stratified horizontal flow in vertically vibrated granular layers	2001	M. Levanon D. C. Rapaport	1
+	Estimation of Average Concentration in the Presence of Nondetectable Values	1990	Richard Hornung Laurence D. Reed	1