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All published works
Action
Title
Year
Authors
+
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Transmission from vaccinated individuals in a large SARS-CoV-2 Delta variant outbreak
2021
Katherine J. Siddle
Lydia A. Krasilnikova
Gage K. Moreno
S. F. Schaffner
Johanna Vostok
Nicholas FitzGerald
Jacob E. Lemieux
Nikolaos Barkas
Christine Loreth
Ivan Specht
+
Evidence of transmission from fully vaccinated individuals in a large outbreak of the SARS-CoV-2 Delta variant in Provincetown, Massachusetts
2021
Katherine J. Siddle
Lydia A. Krasilnikova
Gage K. Moreno
S. F. Schaffner
Johanna Vostok
Nicholas FitzGerald
Jacob E. Lemieux
Nikolaos Barkas
Christine Loreth
Ivan Specht
+
Comparative transmissibility of SARS-CoV-2 variants Delta and Alpha in New England, USA
2021
Rebecca Earnest
Rockib Uddin
Nicholas Matluk
Nicholas Renzette
Katherine J. Siddle
Christine Loreth
Gordon Adams
Christopher H. Tomkins-Tinch
Mary E. Petrone
Jessica E. Rothman
+
Outbreak of SARS-CoV-2 Infections, Including COVID-19 Vaccine Breakthrough Infections, Associated with Large Public Gatherings â Barnstable County, Massachusetts, July 2021
2021
Catherine Brown
Johanna Vostok
Hillary Johnson
Meagan Burns
Radhika Gharpure
Samira Sami
Rebecca T. Sabo
Noémi B. Hall
Anne Foreman
Petra Schubert
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PDF
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Transmission of Severe Acute Respiratory Syndrome Coronavirus 2 (SARS-CoV-2) From Asymptomatic and Presymptomatic Individuals in Healthcare Settings Despite Medical Masks and Eye Protection
2021
Michael Klompas
Meghan A. Baker
Diane Griesbach
Robert Tucker
Glen R. Gallagher
Andrew S. Lang
Timelia Fink
Melissa Cumming
Sandra Smole
Lawrence C. Madoff
+
A SARS-CoV-2 Cluster in an Acute Care Hospital
2021
Michael Klompas
Meghan A. Baker
Chanu Rhee
Robert Tucker
Karen Fiumara
Diane Griesbach
Carin Bennett-Rizzo
Hojjat Salmasian
Rui Wang
Noah Wheeler
+
Phylogenetic analysis of SARS-CoV-2 in the Boston area highlights the role of recurrent importation and superspreading events
2020
Jacob E. Lemieux
Katherine J. Siddle
Bennett Shaw
Christine Loreth
S. F. Schaffner
Adrianne Gladden-Young
Gordon Adams
Timelia Fink
Christopher H. Tomkins-Tinch
Lydia A. Krasilnikova
Common Coauthors
Coauthor
Papers Together
Glen R. Gallagher
7
Sandra Smole
6
Katherine J. Siddle
5
Catherine Brown
5
Andrew S. Lang
5
Lawrence C. Madoff
5
Jacob E. Lemieux
4
Pardis C. Sabeti
4
Stacey Gabriel
4
Christopher H. Tomkins-Tinch
4
Daniel J. Park
4
Bronwyn MacInnis
4
Gordon Adams
4
Christine Loreth
4
William P. Hanage
3
Steven K. Reilly
3
Anthony Philippakis
3
Lydia A. Krasilnikova
3
Sushma Chaluvadi
3
Taylor Brock-Fisher
3
Stephanie Baez
3
Molly Dunn
3
Deirdre Arvidson
3
Johanna Vostok
3
S. F. Schaffner
3
Petra Schubert
3
Hillary Johnson
3
Amanda Kearns
3
Katherine C. DeRuff
3
Vaira Harik
3
Michael Klompas
2
Megan E. Vodzak
2
Nikolaos Barkas
2
Kyle Vernest
2
Gage K. Moreno
2
Selina Clancy
2
Joshua C. Hall
2
Chanu Rhee
2
Matthew Doucette
2
Jessica Brown
2
Katie Larkin
2
Seana Cofsky
2
Sean English
2
Michelle Cipicchio
2
Bradford P. Taylor
2
Marissa Fisher
2
Katelyn S. Messer
2
Meagan Burns
2
Lisa M. Anderson
2
Meghan A. Baker
2
Commonly Cited References
Action
Title
Year
Authors
# of times referenced
+
Estimating the overdispersion in COVID-19 transmission using outbreak sizes outside China
2020
Akira Endo
Sam Abbott
Adam J. Kucharski
Sebastian Funk
2
+
PDF
Chat
Transmission Dynamics of an Outbreak of the COVID-19 Delta Variant B.1.617.2 â Guangdong Province, China, MayâJune 2021
2021
Meng Zhang
Jianpeng Xiao
Aiping Deng
Yingtao Zhang
Yali Zhuang
Ting Hu
Jiansen Li
Hongwei Tu
Bosheng Li
Yan Zhou
2
+
Estimating the overdispersion in COVID-19 transmission using outbreak sizes outside China
2020
Akira Endo
Sam Abbott
Adam J. Kucharski
Sebastian Funk
2
+
PDF
Chat
A New Framework and Software to Estimate Time-Varying Reproduction Numbers During Epidemics
2013
Anne Cori
Neil M. Ferguson
Christophe Fraser
Simon Cauchemez
2
+
Outbreak of SARS-CoV-2 Infections, Including COVID-19 Vaccine Breakthrough Infections, Associated with Large Public Gatherings â Barnstable County, Massachusetts, July 2021
2021
Catherine Brown
Johanna Vostok
Hillary Johnson
Meagan Burns
Radhika Gharpure
Samira Sami
Rebecca T. Sabo
Noémi B. Hall
Anne Foreman
Petra Schubert
2
+
PDF
Chat
Temporal-Spatial Analysis of Severe Acute Respiratory Syndrome among Hospital Inpatients
2005
I. Yu
T. W. Wong
Yuk Lan Chiu
Nelson Lee
Yuguo Li
1
+
PDF
Chat
Aerosol emission and superemission during human speech increase with voice loudness
2019
Sima Asadi
Anthony S. Wexler
Christopher D. Cappa
Santiago Barreda
Nicole M. Bouvier
William D. Ristenpart
1
+
PDF
Chat
Serial Interval of COVID-19 among Publicly Reported Confirmed Cases
2020
Zhanwei Du
Xiao-Ke Xu
Ye Wu
Lin Wang
Benjamin J. Cowling
Lauren Ancel Meyers
1
+
PDF
Chat
Identifying and Interrupting Superspreading EventsâImplications for Control of Severe Acute Respiratory Syndrome Coronavirus 2
2020
Thomas R. Frieden
Christopher T. Lee
1
+
PDF
Chat
Quantifying SARS-CoV-2 transmission suggests epidemic control with digital contact tracing
2020
Luca Ferretti
Chris Wymant
Michelle Kendall
Lele Zhao
Anel Nurtay
Lucie AbelerâDörner
Michael Parker
David Bonsall
Christophe Fraser
1
+
Epidemiology of Covid-19 in a Long-Term Care Facility in King County, Washington
2020
Temet M. McMichael
Dustin W. Currie
Shauna Clark
Sargis Pogosjans
Meagan Kay
Noah G. Schwartz
James Lewis
Atar Baer
Vance Kawakami
Margaret D. Lukoff
1
+
PDF
Chat
Presymptomatic Transmission of SARS-CoV-2 â Singapore, January 23âMarch 16, 2020
2020
Wycliffe Enli Wei
Zongbin Li
Calvin J. Chiew
Sarah Ee Fang Yong
Matthias Paul HS Toh
Vernon J. Lee
1
+
PDF
Chat
Temporal dynamics in viral shedding and transmissibility of COVID-19
2020
Xi He
Eric H. Y. Lau
Peng Wu
Xilong Deng
Jian Wang
Xinxin Hao
Yiu Chung Lau
Jessica Y. Wong
Yujuan Guan
Xinghua Tan
1
+
Prevalence of SARS-CoV-2 Infection in Residents of a Large Homeless Shelter in Boston
2020
Travis P. Baggett
Harrison Keyes
Nora Sporn
Jessie M. Gaeta
1
+
PDF
Chat
Contact Tracing Assessment of COVID-19 Transmission Dynamics in Taiwan and Risk at Different Exposure Periods Before and After Symptom Onset
2020
HaoâYuan Cheng
Shu-Wan Jian
DingâPing Liu
Ta-Chou Ng
WanâTing Huang
Hsien-Ho Lin
1
+
PDF
Chat
Public Health Response to the Initiation and Spread of Pandemic COVID-19 in the United States, February 24âApril 21, 2020
2020
Anne Schuchat
1
+
Longitudinal Surveillance for SARS-CoV-2 RNA Among Asymptomatic Staff in Five Colorado Skilled Nursing Facilities: Epidemiologic, Virologic and Sequence Analysis
2020
Kendra M. Quicke
Emily N. Gallichotte
Nicole R. Sexton
Michael C. Young
Ashley J. Janich
Gregory A. Gahm
Elizabeth J. Carlton
Nicole Ehrhart
Gregory D. Ebel
1
+
PDF
Chat
Clinical characteristics of COVID-19 in 104 people with SARS-CoV-2 infection on the Diamond Princess cruise ship: a retrospective analysis
2020
Sakiko Tabata
Kazuo Imai
Shuichi Kawano
Mayu Ikeda
Tatsuya Kodama
Kazuyasu Miyoshi
Hirofumi Obinata
Satoshi Mimura
Tsutomu Kodera
Manabu Kitagaki
1
+
Reconstructing the course of the COVID-19 epidemic over 2020 for US states and counties: results of a Bayesian evidence synthesis model
2020
Melanie H. Chitwood
Marcus Russi
Kenneth S. Gunasekera
Joshua Havumaki
Fayette Klaassen
Virginia E. Pitzer
Joshua A. Salomon
Nicole A. Swartwood
Joshua L. Warren
Daniel M. Weinberger
1
+
Tracking Changes in SARS-CoV-2 Spike: Evidence that D614G Increases Infectivity of the COVID-19 Virus
2020
Bette Korber
Will Fischer
S. Gnanakaran
Hyejin Yoon
James Theiler
W. P. Abfalterer
Nicolas Hengartner
Elena E. Giorgi
Tanmoy Bhattacharya
Brian Foley
1
+
PDF
Chat
Risk of Coronavirus Disease 2019 Transmission in Train Passengers: an Epidemiological and Modeling Study
2020
Huanjun Liu
Hui Lin
Jinfeng Wang
Chengdong Xu
Andrew J. Tatem
Bin Meng
Xin Zhang
Yifeng Liu
Pengda Wang
Guizhen Wu
1
+
PDF
Chat
Clustering and superspreading potential of SARS-CoV-2 infections in Hong Kong
2020
Dillon C. Adam
Peng Wu
Jessica Y. Wong
Eric H. Y. Lau
Tim K. Tsang
Simon Cauchemez
GM Leung
Benjamin J. Cowling
1
+
PDF
Chat
Estimating epidemiologic dynamics from cross-sectional viral load distributions
2020
James A. Hay
Lee KennedyâShaffer
Sanjat Kanjilal
Niall J. Lennon
Stacey B. Gabriel
Marc Lipsitch
Michael J. Mina
1
+
PDF
Chat
Epidemiology and transmission dynamics of COVID-19 in two Indian states
2020
Ramanan Laxminarayan
Brian Wahl
ShankarReddy Dudala
Kathiresan Gopal
Chandra Mohan B
S. Neelima
K. S. Jawahar Reddy
Jayachandran Radhakrishnan
Joseph A. Lewnard
1
+
PDF
Chat
Masks and Face Coverings for the Lay Public
2020
Thomas Czypionka
Trisha Greenhalgh
Dirk Bassler
Manuel B. Bryant
1
+
Transmission of SARS-CoV-2 Lineage B.1.1.7 in England: Insights from linking epidemiological and genetic data
2021
Erik Volz
Swapnil Mishra
Meera Chand
Jeffrey C. Barrett
Robert Johnson
Lily Geidelberg
Wes Hinsley
Daniel J. Laydon
Gavin Dabrera
Ăine OâToole
1
+
PDF
Chat
Serial Interval and Generation Interval for Imported and Local Infectors, Respectively, Estimated Using Reported Contact-Tracing Data of COVID-19 in China
2021
Menghui Li
Kai Liu
Yukun Song
Wang Ming
Jinshan Wu
1
+
Public health actions to control new SARS-CoV-2 variants
2021
Nathan D. Grubaugh
Emma B. Hodcroft
Joseph R. Fauver
Alexandra Phelan
MĂŒge Ăevik
1
+
PDF
Chat
Twelve years of SAMtools and BCFtools
2021
Petr Danecek
James Bonfield
Jennifer Liddle
John Marshall
Valeriu Ohan
Martin Pollard
Andrew Whitwham
Thomas Keane
Shane McCarthy
Robert M. Davies
1
+
The risk of COVID-19 transmission in train passengers: an epidemiological and modelling study.
2020
Huanjun Liu
Hui Lin
Jinfeng Wang
Chengdong Xu
Andrew J. Tatem
Bin Meng
Xin Zhang
Yifeng Liu
Pengda Wang
Guizhen Wu
1
+
PDF
Chat
Estimated transmissibility and impact of SARS-CoV-2 lineage B.1.1.7 in England
2021
Nicholas G. Davies
Sam Abbott
Rosanna C. Barnard
Christopher I Jarvis
Adam J. Kucharski
James D. Munday
Carl A. B. Pearson
Timothy Russell
Damien C. Tully
Alex Washburne
1
+
PDF
Chat
Serial interval and incubation period of COVID-19: a systematic review and meta-analysis
2021
Muluneh Alene
Leltework Yismaw
Moges Agazhe Assemie
Daniel Bekele Ketema
Wodaje Gietaneh
Tilahun Yemanu Birhan
1
+
PDF
Chat
CDC Interim Recommendations for Fully Vaccinated People
2021
Athalia Christie
Sarah Mbaeyi
Rochelle P. Walensky
1
+
PDF
Chat
Estimating epidemiologic dynamics from cross-sectional viral load distributions
2021
James A. Hay
Lee KennedyâShaffer
Sanjat Kanjilal
Niall J. Lennon
Stacey Gabriel
Marc Lipsitch
Michael J. Mina
1
+
Increased transmissibility and global spread of SARS-CoV-2 variants of concern as at June 2021
2021
Finlay Campbell
Brett N. Archer
Henry LaurensonâSchafer
Yuka Jinnai
Frank Konings
Neale Batra
Boris Pavlin
Katelijn Vandemaele
Maria D. Van Kerkhove
Thibaut Jombart
1
+
Serial intervals observed in SARS-CoV-2 B.1.617.2 variant cases
2021
Rachael Pung
Tze Minn Mak
Adam J. Kucharski
Vernon J. Lee
1
+
LibGuides: COVID-19, Coronavirus, 2019-nCoV, SARS-CoV-2: Interim Public Health Recommendations for Fully Vaccinated People (CDC) October 15, 2021
2020
Theresa Rienzo
1
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PDF
Chat
Serial intervals in SARS-CoV-2 B.1.617.2 variant cases
2021
Rachael Pung
Tze Minn Mak
Adam J. Kucharski
Vernon J. Lee
1
+
The reproductive number of the Delta variant of SARS-CoV-2 is far higher compared to the ancestral SARS-CoV-2 virus
2021
Ying Liu
Joacim Rocklöv
1
+
Serial interval and transmission dynamics during the SARS-CoV-2 Delta variant predominance in South Korea
2021
Sukhyun Ryu
Dasom Kim
JunâSik Lim
Sheikh Taslim Ali
Benjamin J. Cowling
1
+
Immune Responses in Fully Vaccinated Individuals Following Breakthrough Infection with the SARS-CoV-2 Delta Variant in Provincetown, Massachusetts
2021
Aiâris Y. Collier
Catherine Brown
Katherine McMahan
Jingyou Yu
Jinyan Liu
Catherine Jacob-Dolan
Abishek Chandrashekar
Dylan B. Tierney
Jessica L. Ansel
Marjorie Rowe
1
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Community transmission and viral load kinetics of the SARS-CoV-2 delta (B.1.617.2) variant in vaccinated and unvaccinated individuals in the UK: a prospective, longitudinal, cohort study
2021
Anika Singanayagam
Seran Hakki
Jake Dunning
Kieran J Madon
Michael A. Crone
Aleksandra Koycheva
Nieves Derqui
Jack L Barnett
Michael G. Whitfield
Robert Varro
1
+
Multistate Outbreak of SARS-CoV-2 Infections, Including Vaccine Breakthrough Infections, Associated with Large Public Gatherings, United States
2021
Radhika Gharpure
Samira Sami
Johanna Vostok
Hillary Johnson
Noémi B. Hall
Anne Foreman
Rebecca T. Sabo
Petra Schubert
Hanna Shephard
Vance Brown
1
+
Virological and serological kinetics of SARS-CoV-2 Delta variant vaccine breakthrough infections: a multicentre cohort study
2021
Po Ying Chia
Sean Wei Xiang Ong
Calvin J. Chiew
Li Wei Ang
JeanâMarc Chavatte
Tze Minn Mak
Lin Cui
Shirin Kalimuddin
Wan Ni Chia
Chee Wah Tan
1
+
PDF
Chat
Serial Interval and Transmission Dynamics during SARS-CoV-2 Delta Variant Predominance, South Korea
2021
Sukhyun Ryu
Dasom Kim
JunâSik Lim
Sheikh Taslim Ali
Benjamin J. Cowling
1
+
PDF
Chat
Comparative transmissibility of SARS-CoV-2 variants Delta and Alpha in New England, USA
2022
Rebecca Earnest
Rockib Uddin
Nicholas Matluk
Nicholas Renzette
Sarah E. Turbett
Katherine J. Siddle
Christine Loreth
Gordon Adams
Christopher H. Tomkins-Tinch
Mary E. Petrone
1
+
Viral Dynamics of SARS-CoV-2 Variants in Vaccinated and Unvaccinated Persons
2021
Stephen M. Kissler
Joseph R Fauver
Christina Mack
Caroline G. Tai
Mallery I. Breban
Anne E. Watkins
Radhika M Samant
Deverick J. Anderson
Jessica Metti
Gaurav Khullar
1
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PDF
Chat
Masks and face coverings for the lay public: A narrative update
2020
Thomas Czypionka
Trisha Greenhalgh
Manuel Schmid
Dirk Bassler
1
+
PDF
Chat
Combining genomic and epidemiological data to compare the transmissibility of SARS-CoV-2 variants Alpha and Iota
2022
Mary E. Petrone
Jessica E. Rothman
Mallery I. Breban
Isabel M. Ott
Alexis Russell
Erica LasekâNesselquist
Hamada S. Badr
Kevin Kelly
Greg Omerza
Nicholas Renzette
1
+
PDF
Chat
Reconstructing the course of the COVID-19 epidemic over 2020 for US states and counties: Results of a Bayesian evidence synthesis model
2022
Melanie H. Chitwood
Marcus Russi
Kenneth S. Gunasekera
Joshua Havumaki
Fayette Klaassen
Virginia E. Pitzer
Joshua A. Salomon
Nicole A. Swartwood
Joshua L. Warren
Daniel M. Weinberger
1