Alexandre Bône

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All published works

Action	Title	Year	Authors
+ PDF Chat	Guiding the classification of hepatocellular carcinoma on 3D CT-scans using deep and handcrafted radiological features	2025	Emma Sarfati Alexandre Bône Marc-Michel Rohé Christophe Aubé Maxime Ronot Pietro Gori Isabelle Bloch
+ PDF Chat	Learning to Diagnose Cirrhosis from Radiological and Histological Labels with Joint Self and Weakly-Supervised Pretraining Strategies	2023	Emma Sarfati Alexandre Bône Marc-Michel Rohé Pietro Gori Isabelle Bloch
+	Learning to diagnose cirrhosis from radiological and histological labels with joint self and weakly-supervised pretraining strategies	2023	Emma Sarfati Alexandre Bône Marc-Michel Rohé Pietro Gori Isabelle Bloch
+	Weakly-supervised positional contrastive learning: application to cirrhosis classification	2023	Emma Sarfati Alexandre Bône Marc-Michel Rohé Pietro Gori Isabelle Bloch
+	Non-Redundant Combination of Hand-Crafted and Deep Learning Radiomics: Application to the Early Detection of Pancreatic Cancer	2023	Rebeca Vétil Clément Abi-Nader Alexandre Bône Marie‐Pierre Vullierme Marc-Michel Rohé Pietro Gori Isabelle Bloch
+	Learning Shape Distributions from Large Databases of Healthy Organs: Applications to Zero-Shot and Few-Shot Abnormal Pancreas Detection	2022	Rebeca Vétil Clément Abi-Nader Alexandre Bône Marie‐Pierre Vullierme Marc-Michel Rohé Pietro Gori Isabelle Bloch
+	CoRe: An Automated Pipeline for The Prediction of Liver Resection Complexity from Preoperative CT Scans	2022	Omar Ali Alexandre Bône Caterina Accardo Omar Belkouchi Marc-Michel Rohé Éric Vibert Irène Vignon-Clémentel
+ PDF Chat	CoRe: An Automated Pipeline for the Prediction of Liver Resection Complexity from Preoperative CT Scans	2022	Omar Ali Alexandre Bône Caterina Accardo Omar Belkouchi Marc-Michel Rohé Éric Vibert Irène Vignon-Clémentel
+	Benchmarking off-the-shelf statistical shape modeling tools in clinical applications	2021	Anupama Goparaju Krithika Iyer Alexandre Bône Nan Hu Heath B. Henninger Andrew E. Anderson Stanley Durrleman Matthijs Jacxsens Alan Morris Ibolya Csécs
+	Benchmarking off-the-shelf statistical shape modeling tools in clinical applications	2020	Anupama Goparaju Alexandre Bône Nan Hu Heath B. Henninger Andrew E. Anderson Stanley Durrleman Matthijs Jacxsens Alan Morris Ibolya Csécs Nassir Marrouche
+ PDF Chat	Learning the spatiotemporal variability in longitudinal shape data sets	2020	Alexandre Bône Olivier Colliot Stanley Durrleman
+ PDF Chat	Learning adapted coordinate systems for the statistical analysis of anatomical shapes. Application to Alzheimer's disease progression modeling	2020	Alexandre Bône
+ PDF Chat	Learning adapted coordinate systems for the statistical analysis of anatomical shapes. Applications to Alzheimer’s disease progression modeling.	2020	Alexandre Bône
+	Benchmarking off-the-shelf statistical shape modeling tools in clinical applications	2020	Anupama Goparaju Alexandre Bône Nan Hu Heath B. Henninger Andrew E. Anderson Stanley Durrleman Matthijs Jacxsens Alan Morris Ibolya Csécs Nassir Marrouche
+ PDF Chat	Learning the spatio-temporal variability of longitudinal shape data sets: application to Alzheimer's disease progression modeling	2019	Alexandre Bône Olivier Colliot Stanley Durrleman
+ PDF Chat	Learning Low-Dimensional Representations of Shape Data Sets with Diffeomorphic Autoencoders	2019	Alexandre Bône Maxime Louis Olivier Colliot Stanley Durrleman
+ PDF Chat	Clustering of Longitudinal Shape Data Sets Using Mixture of Separate or Branching Trajectories	2019	Vianney Debavelaere Alexandre Bône Stanley Durrleman Stéphanie Allassonnière
+ PDF Chat	Learning Distributions of Shape Trajectories from Longitudinal Datasets: A Hierarchical Model on a Manifold of Diffeomorphisms	2018	Alexandre Bône Olivier Colliot Stanley Durrleman
+	Learning distributions of shape trajectories from longitudinal datasets: a hierarchical model on a manifold of diffeomorphisms	2018	Alexandre Bône Olivier Colliot Stanley Durrleman
+ PDF Chat	Deformetrica 4: An Open-Source Software for Statistical Shape Analysis	2018	Alexandre Bône Maxime Louis Benoît Martin Stanley Durrleman
+	Learning distributions of shape trajectories from longitudinal datasets: a hierarchical model on a manifold of diffeomorphisms	2018	Alexandre Bône Olivier Colliot Stanley Durrleman
+ PDF Chat	Parallel transport in shape analysis : a scalable numerical scheme	2017	Maxime Louis Alexandre Bône Benjamin Charlier Stanley Durrleman
+ PDF Chat	Prediction of the progression of subcortical brain structures in Alzheimer's disease from baseline	2017	Alexandre Bône Maxime Louis Alexandre Routier Jorge Boshell Samper Michael Bacci Benjamin Charlier Olivier Colliot Stanley Durrleman
+ PDF Chat	Parallel Transport in Shape Analysis: A Scalable Numerical Scheme	2017	Maxime Louis Alexandre Bône Benjamin Charlier Stanley Durrleman
+ PDF Chat	Prediction of the Progression of Subcortical Brain Structures in Alzheimer’s Disease from Baseline	2017	Alexandre Bône Maxime Louis Alexandre Routier Jorge Boshell Samper Michael Bacci Benjamin Charlier Olivier Colliot Stanley Durrleman

Common Coauthors

Coauthor	Papers Together
Stanley Durrleman	15
Marc-Michel Rohé	8
Olivier Colliot	8
Maxime Louis	6
Pietro Gori	6
Isabelle Bloch	5
Emma Sarfati	4
Benjamin Charlier	4
Anupama Goparaju	3
Shireen Elhabian	3
Nassir Marrouche	3
Heath B. Henninger	3
Ibolya Csécs	3
Matthijs Jacxsens	3
Michael Bacci	2
Clément Abi-Nader	2
Andrew E. Anderson	2
Omar Belkouchi	2
Éric Vibert	2
Caterina Accardo	2
Jorge Boshell Samper	2
Alan Morris	2
Rebeca Vétil	2
Marie‐Pierre Vullierme	2
Irène Vignon-Clémentel	2
Alexandre Routier	2
Nan Hu	2
Maxime Ronot	1
Stéphanie Allassonnière	1
Isabelle Bloch	1
Nan Hu	1
Omar Ali	1
Benoît Martin	1
Alan Morris	1
Krithika Iyer	1
Christophe Aubé	1
Omar Ali	1
Vianney Debavelaere	1
Andrew E. Anderson	1

Commonly Cited References

Action	Title	Year	Authors	# of times referenced
+ PDF Chat	A Bayesian framework for joint morphometry of surface and curve meshes in multi-object complexes	2016	Pietro Gori Olivier Colliot Linda Marrakchi-Kacem Yulia Worbe Cyril Poupon Andreas Hartmann Nicholas Ayache Stanley Durrleman	8
+	Geodesic Shooting for Computational Anatomy	2006	Michael I. Miller Alain Trouvé Laurent Younès	7
+ PDF Chat	Morphometry of anatomical shape complexes with dense deformations and sparse parameters	2014	Stanley Durrleman Marcel Prastawa Nicolas Charon Julie R. Korenberg Sarang Joshi Guido Gerig Alain Trouvé	7
+ PDF Chat	Intrinsic Statistics on Riemannian Manifolds: Basic Tools for Geometric Measurements	2006	Xavier Pennec	5
+	Bayesian Estimation of Regularization and Atlas Building in Diffeomorphic Image Registration	2013	Miaomiao Zhang Nikhil Singh P. Thomas Fletcher	5
+	Geodesic Regression and the Theory of Least Squares on Riemannian Manifolds	2012	P. Thomas Fletcher	5
+ PDF Chat	Geodesic regression of image and shape data for improved modeling of 4D trajectories	2014	James Fishbaugh Marcel Prastawa Guido Gerig Stanley Durrleman	5
+ PDF Chat	Hierarchical Geodesic Models in Diffeomorphisms	2015	Nikhil Singh Jacob Hinkle Sarang Joshi P. Thomas Fletcher	5
+ PDF Chat	Learning spatio-temporal trajectories from manifold-valued longitudinal data	2015	Jean-Baptiste Schiratti Stéphanie Allassonnière Olivier Colliot Stanley Durrleman	4
+ PDF Chat	Parallel Transport in Shape Analysis: A Scalable Numerical Scheme	2017	Maxime Louis Alexandre Bône Benjamin Charlier Stanley Durrleman	4
+ PDF Chat	Shape Manifolds, Procrustean Metrics, and Complex Projective Spaces	1984	David G. Kendall	4
+	An Adaptive Version for the Metropolis Adjusted Langevin Algorithm with a Truncated Drift	2006	Yves F. Atchadé	3
+	Maximum Likelihood from Incomplete Data Via the <i>EM</i> Algorithm	1977	A. P. Dempster N. M. Laird Donald B. Rubin	3
+	Rate-Invariant Analysis of Trajectories on Riemannian Manifolds with Application in Visual Speech Recognition	2014	Jingyong Su Anuj Srivastava Fillipe D. M. de Souza Sudeep Sarkar	3
+ PDF Chat	Convergence of a stochastic approximation version of the EM algorithm	1999	Bernard Delyon Marc Lavielle Éric Moulines	3
+ PDF Chat	A Riemannian Framework for Tensor Computing	2005	Xavier Pennec Pierre Fillard Nicholas Ayache	3
+	Statistics on the space of trajectories for longitudinal data analysis	2017	Rudrasis Chakraborty Monami Banerjee Baba C. Vemuri	3
+ PDF Chat	Riemannian Nonlinear Mixed Effects Models: Analyzing Longitudinal Deformations in Neuroimaging	2017	Hyunwoo J. Kim Nagesh Adluru Heemanshu Suri Baba C. Vemuri Sterling C. Johnson Vikas Singh	3
+ PDF Chat	Sasaki metrics for analysis of longitudinal data on manifolds	2012	P. Muralidharan P. Thomas Fletcher	3
+ PDF Chat	Construction of Bayesian deformable models via a stochastic approximation algorithm: A convergence study	2010	Stéphanie Allassonnière Estelle Kuhn Alain Trouvé	3
+	Landmark matching via large deformation diffeomorphisms	2000	Sarang Joshi Michael I. Miller	3
+ PDF Chat	Bayesian Mixed Effect Atlas Estimation with a Diffeomorphic Deformation Model	2015	Stéphanie Allassonnière Stanley Durrleman Estelle Kuhn	3
+ PDF Chat	The Varifold Representation of Nonoriented Shapes for Diffeomorphic Registration	2013	Nicolas Charon Alain Trouvé	3
+ PDF Chat	Learning Distributions of Shape Trajectories from Longitudinal Datasets: A Hierarchical Model on a Manifold of Diffeomorphisms	2018	Alexandre Bône Olivier Colliot Stanley Durrleman	3
+ PDF Chat	Shapes and Diffeomorphisms	2019	Laurent Younès	3
+ PDF Chat	A Fanning Scheme for the Parallel Transport along Geodesics on Riemannian Manifolds	2018	Maxime Louis Benjamin Charlier Paul Jusselin Susovan Pal Stanley Durrleman	3
+ PDF Chat	Toward a Comprehensive Framework for the Spatiotemporal Statistical Analysis of Longitudinal Shape Data	2012	Stanley Durrleman Xavier Pennec Alain Trouvé José Braga Guido Gerig Nicholas Ayache	2
+	Biostatistical Analysis (2nd ed.).	1986	Timothy J. Breen Jerrold H. Zar	2
+ PDF Chat	Multivariate General Linear Models (MGLM) on Riemannian Manifolds with Applications to Statistical Analysis of Diffusion Weighted Images	2014	Hyunwoo J. Kim Nagesh Adluru Maxwell D. Collins Moo K. Chung Barbara B. Bendin Sterling C. Johnson Richard J. Davidson Vikas Singh	2
+ PDF Chat	Shape analysis, a field in need of careful validation	2014	Yi Gao Tammy Riklin Raviv Sylvain Bouix	2
+ PDF Chat	Shape analysis of the basioccipital bone in Pax7-deficient mice	2017	Joshua Cates Lisa Nevell Suresh I. Prajapati Laura D. Nelon Jerry Y. Chang Matthew E. Randolph Bernard Wood Charles Keller Ross T. Whitaker	2
+ PDF Chat	On the limited memory BFGS method for large scale optimization	1989	Cheng‐Di Dong Jorge Nocedal	2
+ PDF Chat	Entropy-based particle correspondence for shape populations	2015	İpek Oğuz Joshua Cates Manasi Datar Beatriz Paniagua Thomas Fletcher Clement Vachet Martin Styner Ross T. Whitaker	2
+	3D Statistical Shape Models Using Direct Optimisation of Description Length	2002	Rhodri Davies Carole Twining T.F. Cootes John C. Waterton Chris Taylor	2
+	The utility of osteon shape and circularity for differentiating human and non‐human Haversian bone	2012	Victoria M. Dominguez C. M. D. Crowder	2
+ PDF Chat	The potential of statistical shape modelling for geometric morphometric analysis of human teeth in archaeological research	2017	Christopher Woods Christianne Fernée Martin Browne Sonia Zakrzewski Alexander Dickinson	2
+	Shape Discrimination in the Hippocampus Using an MDL Model	2003	Rhodri Davies Carole Twining Philip D. Allen T.F. Cootes Chris Taylor	2
+	Generalized procrustes analysis	1975	J. C. Gower	2
+	Statistical shape analysis: clustering, learning, and testing	2005	Anuj Srivastava S. K. Joshi Washington Mio Xiuwen Liu	2
+	Framework for the Statistical Shape Analysis of Brain Structures using SPHARM-PDM.	2006	Martin Styner İpek Oğuz Shun Xu Christian Brechbühler Dimitrios Pantazis James J. Levitt Martha E. Shenton Guido Gerig	2
+ PDF Chat	<scp>Morpho</scp>J: an integrated software package for geometric morphometrics	2010	Christian Peter Klingenberg	2
+ PDF Chat	Polynomial Regression on Riemannian Manifolds	2012	Jacob Hinkle Prasanna Muralidharan P. Thomas Fletcher Sarang Joshi	2
+	Quicksilver: Fast predictive image registration – A deep learning approach	2017	Xiao Yang Roland Kwitt Martin Styner Marc Niethammer	2
+	Statistical shape and appearance models of bones	2013	Nazlı Sarkalkan Harrie Weinans Amir A. Zadpoor	2
+	An efficient method for finding the minimum of a function of several variables without calculating derivatives	1964	M. J. D. Powell	2
+	Posterior shape models	2013	Thomas Albrecht Marcel Lüthi Thomas M. Gerig Thomas Vetter	2
+ PDF Chat	Evaluating Shape Correspondence for Statistical Shape Analysis: A Benchmark Study	2008	Brent C. Munsell Priyanka Dalal Song Wang	2
+ PDF Chat	Spatiotemporal Atlas Estimation for Developmental Delay Detection in Longitudinal Datasets	2009	Stanley Durrleman Xavier Pennec Alain Trouvé Guido Gerig Nicholas Ayache	2
+	Boundary and medial shape analysis of the hippocampus in schizophrenia	2004	Martin Styner Jeffrey A. Lieberman Dimitrios Pantazis Guido Gerig	2
+	The statistical analysis of shape data	1989	Kanti V. Mardia Ian L. Dryden	2