Tina Toni

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All published works

Action	Title	Year	Authors
+ PDF Chat	The Alzheimer's Disease Prediction Of Longitudinal Evolution (TADPOLE) Challenge: Results after 1 Year Follow-up	2021	Răzvan V. Marinescu Neil P. Oxtoby Alexandra L. Young Esther E. Bron Arthur W. Toga Michael W. Weiner Frederik Barkhof Nick C. Fox Arman Eshaghi Tina Toni
+	The Alzheimer's Disease Prediction Of Longitudinal Evolution (TADPOLE) Challenge: Results after 1 Year Follow-up	2020	Răzvan V. Marinescu Neil P. Oxtoby Alexandra L. Young Esther E. Bron Arthur W. Toga Michael W. Weiner Frederik Barkhof Nick C. Fox Arman Eshaghi Tina Toni
+	A framework for parameter estimation and model selection from experimental data in systems biology using approximate Bayesian computation	2014	Juliane Liepe Paul Kirk Sarah Filippi Tina Toni C. Barnes Michael P. H. Stumpf
+ PDF Chat	Designing attractive models via automated identification of chaotic and oscillatory dynamical regimes	2011	Daniel Silk Paul Kirk C. Barnes Tina Toni Anna Rose Simon Moon Margaret J. Dallman Michael P. H. Stumpf
+	Inference of Signalling Pathway Models	2011	Tina Toni Juliane Liepe Michael P. H. Stumpf
+ PDF Chat	ABC SMC for parameter estimation and model selection with applications in systems biology	2011	Tina Toni
+ PDF Chat	ABC-SysBio—approximate Bayesian computation in Python with GPU support	2010	Juliane Liepe C. Barnes Erika Cule Kamil Erguler Paul Kirk Tina Toni Michael P. H. Stumpf
+ PDF Chat	Parameter Inference and Model Selection in Signaling Pathway Models	2010	Tina Toni Michael P. H. Stumpf
+	Approximate Bayesian computation for parameter inference and model selection in systems biology	2010	Tina Toni
+ PDF Chat	Simulation-based model selection for dynamical systems in systems and population biology	2009	Tina Toni Michael P. H. Stumpf
+	Tutorial on ABC rejection and ABC SMC for parameter estimation and model selection	2009	Tina Toni Michael P. H. Stumpf
+	The ABC of reverse engineering biological signalling systems	2009	Maria Secrier Tina Toni Michael P. H. Stumpf
+	Parameter inference and model selection in signaling pathway models	2009	Tina Toni Michael P. H. Stumpf
+	Simulation-based model selection for dynamical systems in systems and population biology	2009	Tina Toni Michael P. H. Stumpf
+ PDF Chat	Approximate Bayesian computation scheme for parameter inference and model selection in dynamical systems	2008	Tina Toni David Welch Natalja Strelkowa Andreas Ipsen Michael P. H. Stumpf

Common Coauthors

Coauthor	Papers Together
Michael P. H. Stumpf	11
C. Barnes	3
Juliane Liepe	3
Paul Kirk	3
Arthur W. Toga	2
Robert Ciszek	2
Denisa Rimocea	2
Karol Estrada	2
Arman Eshaghi	2
Deqiang Qiu	2
Esther E. Bron	2
B.T. Thomas Yeo	2
Alex Kelner	2
Kaixian Yu	2
Steven M. Hill	2
Brian D. M. Tom	2
Jussi Tohka	2
Manon Ansart	2
Zhiyue Huang	2
Ionut Buciuman	2
Samuel Iddi	2
Leon M. Aksman	2
Pascal Lu	2
Keli Liu	2
Dan Halbersberg	2
Alexandra L. Young	2
Michael Donohue	2
Christina Rabe	2
Stefan Klein	2
Güray Erus	2
Joseph B. Cole	2
Nick C. Fox	2
Simon R. White	2
Aristeidis Sotiras	2
Jimit Doshi	2
Daniel C. Alexander	2
Terry Lyons	2
Christos Davatzikos	2
James Howlett	2
Bruno Jedynak	2
Aviv Nahon	2
Veronika Lunina	2
William R. Engels	2
Nanbo Sun	2
Lauge Sørensen	2
Bernd Taschler	2
Héctor Corrada Bravo	2
Emmanuel Jammeh	2
Suman Sedai	2
Clémentine Fourrier	2

Commonly Cited References

Action	Title	Year	Authors	# of times referenced
+ PDF Chat	Approximate Bayesian computation scheme for parameter inference and model selection in dynamical systems	2008	Tina Toni David Welch Natalja Strelkowa Andreas Ipsen Michael P. H. Stumpf	9
+	Sequential Monte Carlo without likelihoods	2007	Scott A. Sisson Yanan Fan Mark M. Tanaka	8
+ PDF Chat	Universally Sloppy Parameter Sensitivities in Systems Biology Models	2007	Ryan N. Gutenkunst Joshua J. Waterfall Fergal Casey Kevin Brown Christopher R. Myers James P. Sethna	7
+ PDF Chat	Simulation-based model selection for dynamical systems in systems and population biology	2009	Tina Toni Michael P. H. Stumpf	5
+ PDF Chat	Approximate Bayesian Computation in Population Genetics	2002	Mark Beaumont Wenyang Zhang David J. Balding	5
+	Bayes Factors	1995	Robert E. Kass Adrian E. Raftery	4
+ PDF Chat	Sequential Monte Carlo Samplers	2006	Pierre Del Moral Arnaud Doucet Ajay Jasra	3
+	An Introduction to the Bootstrap	1994	Bradley Efron Robert Tibshirani	3
+ PDF Chat	Adaptive approximate Bayesian computation	2009	Mark Beaumont J. M. Cornuet Jean‐Michel Marin Christian P. Robert	3
+	The ABC of reverse engineering biological signalling systems	2009	Maria Secrier Tina Toni Michael P. H. Stumpf	3
+	Bayesian Inference for Stochastic Kinetic Models Using a Diffusion Approximation	2005	Andrew Golightly Darren J. Wilkinson	3
+ PDF Chat	An adaptive sequential Monte Carlo method for approximate Bayesian computation	2011	Pierre Del Moral Arnaud Doucet Ajay Jasra	3
+	When kinases meet mathematics: the systems biology of MAPK signalling	2005	Walter Kölch Muffy Calder David Gilbert	3
+ PDF Chat	Stochastic ranking for constrained evolutionary optimization	2000	Thomas Philip Rúnarsson Xin Yao	3
+ PDF Chat	Model criticism based on likelihood-free inference, with an application to protein network evolution	2009	Oliver Ratmann Christophe Andrieu Carsten Wiuf Sylvia Richardson	2
+	Model Selection and Mixed-Effects Modeling of HIV Infection Dynamics	2006	David M. Bortz Patrick W. Nelson	2
+ PDF Chat	Inferring population history with<i>DIY ABC</i>: a user-friendly approach to approximate Bayesian computation	2008	Jean‐Marie Cornuet Filipe Santos Mark Beaumont Christian P. Robert Jean‐Michel Marin David J. Balding Thomas Guillemaud Arnaud Estoup	2
+	A Method for Computing Profile-Likelihood-Based Confidence Intervals	1988	David Venzon Suresh H. Moolgavkar	2
+ PDF Chat	ABC-SysBio—approximate Bayesian computation in Python with GPU support	2010	Juliane Liepe C. Barnes Erika Cule Kamil Erguler Paul Kirk Tina Toni Michael P. H. Stumpf	2
+ PDF Chat	The statistical mechanics of complex signaling networks: nerve growth factor signaling	2004	Kevin Brown Charles Hill Guillermo Calero Christopher R. Myers Kelvin H. Lee James P. Sethna Richard A. Cerione	2
+ PDF Chat	ABC likelihood-free methods for model choice in Gibbs random fields	2009	Aude Grelaud Jean‐Michel Marin Christian P. Robert F. Rodolphe Jean-François Taly	2
+	Exact stochastic simulation of coupled chemical reactions	1977	Daniel T. Gillespie	2
+ PDF Chat	Estimating the Dimension of a Model	1978	Gideon Schwarz	2
+ PDF Chat	A hierarchical Bayesian approach for parameter estimation in HIV models	2005	H. T. Banks S.L. Grove Shuhua Hu Yanyuan Ma	2
+ PDF Chat	Monte Carlo Statistical Methods	2000	Hoon Kim Christian P. Robert George Casella	1
+ PDF Chat	A mathematical model of common-cold epidemics on Tristan da Cunha	1971	B. J. Hammond D. A. J. Tyrrell	1
+ PDF Chat	ABC methods for model choice in Gibbs random fields	2009	Aude Grelaud Christian P. Robert Jean‐Michel Marin	1
+ PDF Chat	Inference on population history and model checking using DNA sequence and microsatellite data with the software DIYABC (v1.0)	2010	Jean‐Marie Cornuet Virginie Ravigné Arnaud Estoup	1
+ PDF Chat	Bayesian model averaging: a tutorial (with comments by M. Clyde, David Draper and E. I. George, and a rejoinder by the authors	1999	Jennifer A. Hoeting David Madigan Adrian E. Raftery Chris Volinsky	1
+ PDF Chat	Approximate Bayesian computation (ABC) gives exact results under the assumption of model error	2013	R. Wilkinson	1
+	Parameter estimation in some diffusion and reaction models: An application of bifurcation theory	1984	Françis Conrad Vera Treguera-Seguda	1
+ PDF Chat	Approximate Bayesian Computation	2013	Mikael Sunnåker Alberto Giovanni Busetto Elina Numminen Jukka Corander Matthieu Foll Christophe Dessimoz	1
+	Household and Community Transmission Parameters from Final Distributions of Infections in Households	1982	Ira M. Longini James S. Koopman	1
+	Computing Bayes Factors by Combining Simulation and Asymptotic Approximations	1997	Thomas J. DiCiccio Robert E. Kass Adrian E. Raftery Larry Wasserman	1
+ PDF Chat	On validation and invalidation of biological models	2009	James Anderson Antonis Papachristodoulou	1
+	Approximate Bayesian Computation (ABC) in practice	2010	Katalin Csilléry Michaël G. B. Blum Oscar E. Gaggiotti Olivier François	1
+	Probability and Computing: Randomized Algorithms and Probabilistic Analysis	2005	Michael Mitzenmacher Eli Upfal	1
+	Bayesian Computation and Model Selection in Population Genetics	2009	Christoph Leuenberger Daniel Wegmann Laurent Excoffier	1
+	An invariant form for the prior probability in estimation problems	1946	Harold Jeffreys	1
+	Mapping regions with different bifurcation diagrams of a reverse‐flow reactor	1997	Johannes Khinast Dan Luss	1
+ PDF Chat	Analyses of Infectious Disease Data from Household Outbreaks by Markov Chain Monte Carlo Methods	2000	Philip D. O’Neill David J. Balding Niels G. Becker Mervi Eerola Denis Mollison	1
+	Optimizing Threshold - Schedules for Approximate Bayesian Computation Sequential Monte Carlo Samplers: Applications to Molecular Systems	2012	Daniel Silk Saran Filippi Michael P. H. Stumpf	1
+	Lyapunov Characteristic Exponents for smooth dynamical systems and for hamiltonian systems; a method for computing all of them. Part 1: Theory	1980	Giancarlo Benettin L. Galgani Antonio Giorgilli Jean-Marie Strelcyn	1
+	The Analysis of Panel Data under a Markov Assumption	1985	John D. Kalbfleisch J. F. Lawless	1
+	ABC: A useful Bayesian tool for the analysis of population data	2009	João S. Lopes Mark Beaumont	1
+	Exact Bayesian Inference and Model Selection for Stochastic Models of Epidemics Among a Community of Households	2006	Damian Clancy Philip D. O’Neill	1
+	Book review: “Bayesian Data Analysis,” Second Edition by A. Gelman, J.B. Carlin, H.S. Stern, and D.B. Rubin Chapman & Hall/CRC, 2004	2005	Jerry Nedelman	1
+	A Generalized Stochastic Model for the Analysis of Infectious Disease Final Size Data	1991	Cheryl L. Addy Ira M. Longini Michael Haber	1
+	Developing a delay differential equation solver	1992	Christopher Paul	1
+ PDF Chat	Discussion on the paper by Feranhead and Prangle	2012	J Moller	1