Krzysztof J. Gorgolewski

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All published works

Action	Title	Year	Authors
+	The past, present, and future of the brain imaging data structure (BIDS)	2024	Russell A. Poldrack Christopher J. Markiewicz Stefan Appelhoff Yoni K. Ashar Tibor Auer Sylvain Baillet Shashank Bansal Leandro Beltrachini Christian Bénar Giacomo Bertazzoli
+	The Past, Present, and Future of the Brain Imaging Data Structure (BIDS).	2024	Russell A. Poldrack Christopher J. Markiewicz Stefan Appelhoff Yoni K. Ashar Tibor Auer Sylvain Baillet Shashank Bansal Leandro Beltrachini Christian Bénar Giacomo Bertazzoli
+	DeepDefacer: Automatic Removal of Facial Features via U-Net Image Segmentation	2022	Anish Khazane Julien Hoachuck Krzysztof J. Gorgolewski Russell A. Poldrack
+ PDF Chat	The Open Brain Consent: Informing research participants and obtaining consent to share brain imaging data	2021	Élise Bannier Gareth J. Barker Valentina Borghesani Nils Broeckx Patricia Clement Kyrre E. Emblem Satrajit Ghosh Enrico Glerean Krzysztof J. Gorgolewski Marko Havu
+ PDF Chat	The Open Brain Consent: Informing research participants and obtaining consent to share brain imaging data	2020	Élise Bannier Gareth J. Barker Valentina Borghesani Nils Broeckx Patricia Clement María de la Iglesia-Vayá Kyrre E. Emblem Satrajit Ghosh Enrico Glerean Krzysztof J. Gorgolewski
+	Fine-grain atlases of functional modes for fMRI analysis	2020	Kamalaker Dadi Gaël Varoquaux Antonia Machlouzarides-Shalit Krzysztof J. Gorgolewski Demián Wassermann Bertrand Thirion Arthur Mensch
+ PDF Chat	iEEG-BIDS, extending the Brain Imaging Data Structure specification to human intracranial electrophysiology	2019	Chris Holdgraf Stefan Appelhoff Stephan Bickel Kristofer E. Bouchard Sasha D’Ambrosio Olivier David Orrin Devinsky Ben Dichter Adeen Flinker Brett L. Foster
+ PDF Chat	EEG-BIDS, an extension to the brain imaging data structure for electroencephalography	2019	Cyril Pernet Stefan Appelhoff Krzysztof J. Gorgolewski Guillaume Flandin Christophe Phillips Arnaud Delorme Robert Oostenveld
+	BIDS-iEEG: an extension to the brain imaging data structure (BIDS) specification for human intracranial electrophysiology	2018	Chris Holdgraf Stefan Appelhoff Stephan Bickel Kristofer E. Bouchard Sasha D’Ambrosio Olivier David Orrin Devinsky Ben Dichter Adeen Flinker Brett L. Foster
+	Computational and informatics advances for reproducible data analysis in neuroimaging	2018	Russell A. Poldrack Krzysztof J. Gorgolewski Gaël Varoquaux
+	Boutiques: a flexible framework for automated application integration in computing platforms	2017	Tristan Glatard Gregory Kiar Tristan Aumentado-Armstrong Natacha Beck Pierre Bellec R. Bernard Axel Bonnet Sorina Camarasu-Pop Frédéric Cervenansky Samir Das
+ PDF Chat	Science in the cloud (SIC): A use case in MRI connectomics	2017	Gregory Kiar Krzysztof J. Gorgolewski Dean M. Kleissas William Gray Roncal Brian Litt Brian A. Wandell Russell A. Poldrack Martin Wiener R. Jacob Vogelstein Randal Burns
+	Boutiques: a flexible framework for automated application integration in computing platforms	2017	Tristan Glatard Gregory Kiar Tristan Aumentado-Armstrong Natacha Beck Pierre Bellec R. Bernard Axel Bonnet Sorina Camarasu-Pop Frédéric Cervenansky Samir Das
+ PDF Chat	The Dynamics of Functional Brain Networks: Integrated Network States during Cognitive Task Performance	2016	James M. Shine Patrick G. Bissett Peter T. Bell Oluwasanmi Koyejo Joshua H. Balsters Krzysztof J. Gorgolewski Craig A. Moodie Russell A. Poldrack
+	Science In the Cloud (SIC): A use case in MRI Connectomics	2016	Gregory Kiar Krzysztof J. Gorgolewski Dean M. Kleissas William Gray Roncal Brian Litt Brian A. Wandell Russel A. Poldrack Martin Wiener R. Jacob Vogelstein Randal Burns
+	Dynamic fluctuations in global brain network topology characterize functional states during rest and behavior	2015	James M. Shine Peter T. Bell Oluwasanmi Koyejo Patrick G. Bissett Krzysztof J. Gorgolewski Craig A. Moodie Russell A. Poldrack
+	Dynamic fluctuations in integration and segregation within the human functional connectome	2015	James M. Shine Peter T. Bell Oluwasanmi Koyejo Krzysztof J. Gorgolewski Craig A. Moodie Russell A. Poldrack
+	NeuroVault.org: A web database for sharing statistical parametric maps	2013	Krzysztof J. Gorgolewski Tal Yarkoni Satrajit Ghosh Russell A. Poldrack Jean‐Baptiste Poline Yannick Schwarz Daniel S. Margulies

Common Coauthors

Coauthor	Papers Together
Russell A. Poldrack	9
Robert Oostenveld	7
Gregory Kiar	6
Cyril Pernet	5
Stefan Appelhoff	5
Bradley Voytek	4
Orrin Devinsky	4
María de la Iglesia-Vayá	4
Yaroslav Halchenko	4
Nicole C. Swann	4
Gaël Varoquaux	4
Sasha D’Ambrosio	4
Patricia Clement	4
Henk J. M. M. Mutsaerts	4
Jonathan C. Lau	4
Dora Hermes	4
Christopher J. Honey	4
Peer Herholz	4
Camille Maumet	4
Brian A. Wandell	4
Oluwasanmi Koyejo	3
Arnaud Delorme	3
Christophe Phillips	3
Guillaume Flandin	3
Jean‐Baptiste Poline	3
Satrajit Ghosh	3
James M. Shine	3
Peter T. Bell	3
Bertrand Thirion	3
Craig A. Moodie	3
Rémi Gau	2
Alessio Giacomel	2
Jonathan Winawer	2
David M. Groppe	2
Jose Manuel Saborit-Torres	2
Martin Wilson	2
Stephan Bickel	2
Aysegul Gunduz	2
Sylvain Takerkart	2
Christopher J. Markiewicz	2
Martin Szinte	2
Julius Welzel	2
Mathieu Boudreau	2
Axel Bonnet	2
Sajjad Torabian	2
Pradeep Reddy Raamana	2
Filippo Maria Castelli	2
Alan C. Evans	2
Brett L. Foster	2
Kyrre E. Emblem	2

Commonly Cited References

Action	Title	Year	Authors	# of times referenced
+ PDF Chat	EEG-BIDS, an extension to the brain imaging data structure for electroencephalography	2019	Cyril Pernet Stefan Appelhoff Krzysztof J. Gorgolewski Guillaume Flandin Christophe Phillips Arnaud Delorme Robert Oostenveld	3
+ PDF Chat	iEEG-BIDS, extending the Brain Imaging Data Structure specification to human intracranial electrophysiology	2019	Chris Holdgraf Stefan Appelhoff Stephan Bickel Kristofer E. Bouchard Sasha D’Ambrosio Olivier David Orrin Devinsky Ben Dichter Adeen Flinker Brett L. Foster	3
+ PDF Chat	Deriving reproducible biomarkers from multi-site resting-state data: An Autism-based example	2016	Alexandre Abraham Michael P. Milham Adriana Di Martino R. Cameron Craddock Dimitris Samaras Bertrand Thirion Gaël Varoquaux	2
+ PDF Chat	Learning and comparing functional connectomes across subjects	2013	Gaël Varoquaux R. Cameron Craddock	2
+ PDF Chat	NEMAR: an open access data, tools and compute resource operating on neuroelectromagnetic data	2022	Arnaud Delorme Dung Truong Choonhan Youn Subhashini Sivagnanam Claire Stirm Kenneth Yoshimoto Russell A. Poldrack Amitava Majumdar Scott Makeig	2
+ PDF Chat	Morphological and population genomic evidence that human faces have evolved to signal individual identity	2014	Michael J. Sheehan Michael W. Nachman	2
+ PDF Chat	brainlife.io: a decentralized and open-source cloud platform to support neuroscience research	2024	Soichi Hayashi Bradley Caron Anibal Sólon Heinsfeld Sophia Vinci‐Booher Brent McPherson Daniel Bullock Giulia Bertò Guiomar Niso Sandra Hanekamp Daniel Levitas	2
+	BIDS-EEG: an extension to the Brain Imaging Data Structure (BIDS) Specification for electroencephalography	2018	Cyril Pernet Stefan Appelhoff Guillaume Flandin Christophe Phillips Arnaud Delorme Robert Oostenveld	2
+ PDF Chat	A well-conditioned estimator for large-dimensional covariance matrices	2003	Olivier Ledoit Michael Wolf	1
+ PDF Chat	A group model for stable multi-subject ICA on fMRI datasets	2010	Gaël Varoquaux Sepideh Sadaghiani Philippe Pinel Andreas Kleinschmidt Jean‐Baptiste Poline Bertrand Thirion	1
+ PDF Chat	Modeling individual differences in response time and accuracy in numeracy	2015	Roger Ratcliff Clarissa A. Thompson Gail McKoon	1
+	Scikit-learn: Machine Learning in Python	2012	Fabián Pedregosa Gaël Varoquaux Alexandre Gramfort Vincent Michel Bertrand Thirion Olivier Grisel Mathieu Blondel Peter Prettenhofer Ron J. Weiss Vincent Dubourg	1
+	Controlling the False Discovery Rate: A Practical and Powerful Approach to Multiple Testing	1995	Yoav Benjamini Yosef Hochberg	1
+	Statistical parametric maps in functional imaging: A general linear approach	1994	Karl Friston Andrew P. Holmes Keith J. Worsley J.‐P. Poline Chris Frith R. S. J. Frackowiak	1
+	The Unity and Diversity of Executive Functions and Their Contributions to Complex “Frontal Lobe” Tasks: A Latent Variable Analysis	2000	Akira Miyake Naomi P. Friedman Michael J. Emerson Alexander Witzki Amy Howerter Tor D. Wager	1
+ PDF Chat	Best Practices for Scientific Computing	2014	Greg Wilson D. A. Aruliah C. Titus Brown Neil Chue Hong M. Ryleigh Davis Richard Guy Steven H. D. Haddock Kathryn D. Huff Ian M. Mitchell Mark D. Plumbley	1
+	Cluster failure: Why fMRI inferences for spatial extent have inflated false-positive rates	2016	Anders Eklund Thomas E. Nichols Hans Knutsson	1
+ PDF Chat	Nonparametric permutation tests for functional neuroimaging: A primer with examples	2001	Thomas E. Nichols Andrew P. Holmes	1
+	Dynamic reconfiguration of human brain networks during learning	2011	Danielle S. Bassett Nicholas F. Wymbs Mason A. Porter Peter J. Mucha Jean M. Carlson Scott T. Grafton	1
+ PDF Chat	The NumPy Array: A Structure for Efficient Numerical Computation	2011	Stéfan van der Walt Steven C. Colbert Gaël Varoquaux	1
+ PDF Chat	Machine learning for neuroimaging with scikit-learn	2014	Alexandre Abraham Fabian Pedregosa Michael Eickenberg Philippe Gervais Andreas Mueller Jean Kossaifi Alexandre Gramfort Bertrand Thirion Gaël Varoquaux	1
+	Topographical Variation of the Human Primary Cortices: Implications for Neuroimaging, Brain Mapping, and Neurobiology	1993	J. Rademacher V.S. Caviness Helmuth Steinmetz Albert M. Galaburda	1
+ PDF Chat	Fast reproducible identification and large-scale databasing of individual functional cognitive networks	2007	Philippe Pinel Bertrand Thirion Sébastien Mériaux Antoinette Jobert Julien Serres Denis Le Bihan Jean‐Baptiste Poline Stanislas Dehaene	1
+	The Elements of Statistical Learning	2001	Trevor Hastie J. Friedman Robert Tibshirani	1
+	Deep Convolutional Neural Networks for Computer-Aided Detection: CNN Architectures, Dataset Characteristics and Transfer Learning	2016	Hoo-Chang Shin Holger R. Roth Mingchen Gao Le Lü Ziyue Xu Isabella Nogues Jianhua Yao Daniel J. Mollura Ronald M. Summers	1
+ PDF Chat	Region segmentation for sparse decompositions: better brain parcellations from rest fMRI	2014	Alexandre Abraham Elvis Dohmatob Bertrand Thirion Dimitris Samaras Gaël Varoquaux	1
+	The problem of functional localization in the human brain	2002	Thomas Morgan	1
+	Dictionary Learning for Massive Matrix Factorization	2016	Arthur Mensch Julien Mairal Bertrand Thirion Gaël Varoquaux	1
+ PDF Chat	Assessing and tuning brain decoders: Cross-validation, caveats, and guidelines	2016	Gaël Varoquaux Pradeep Reddy Raamana Denis A. Engemann Andrés Hoyos-Idrobo Yannick Schwartz Bertrand Thirion	1
+ PDF Chat	Stochastic Subsampling for Factorizing Huge Matrices	2017	Arthur Mensch Julien Mairal Bertrand Thirion Gaël Varoquaux	1
+ PDF Chat	Learning Neural Representations of Human Cognition across Many fMRI Studies	2017	Arthur Mensch Julien Mairal Danilo Bzdok Bertrand Thirion Gaël Varoquaux	1
+ PDF Chat	Refacing: Reconstructing Anonymized Facial Features Using GANS	2019	David Abramian Anders Eklund	1
+	The Open Connectome Project Data Cluster: Scalable Analysis and Vision for High-Throughput Neuroscience	2013	Randal Burns William Gray Roncal Dean M. Kleissas Kunal Lillaney Priya Manavalan Eric Perlman Daniel R. Berger Davi D. Bock Kwanghun Chung Logan Grosenick	1
+	BIDS-iEEG: an extension to the brain imaging data structure (BIDS) specification for human intracranial electrophysiology	2018	Chris Holdgraf Stefan Appelhoff Stephan Bickel Kristofer E. Bouchard Sasha D’Ambrosio Olivier David Orrin Devinsky Ben Dichter Adeen Flinker Brett L. Foster	1
+	De-anonymization Attacks on Neuroimaging Datasets	2019	Vikram Ravindra Ananth Grama	1
+ PDF Chat	Compressed online dictionary learning for fast resting-state fMRI decomposition	2016	Arthur Mensch Gaël Varoquaux Bertrand Thirion	1
+ PDF Chat	Detection of Brain Functional-Connectivity Difference in Post-stroke Patients Using Group-Level Covariance Modeling	2010	Gaël Varoquaux Flore Baronnet Andreas Kleinschmidt Pierre Fillard Bertrand Thirion	1
+ PDF Chat	The Open Brain Consent: Informing research participants and obtaining consent to share brain imaging data	2021	Élise Bannier Gareth J. Barker Valentina Borghesani Nils Broeckx Patricia Clement Kyrre E. Emblem Satrajit Ghosh Enrico Glerean Krzysztof J. Gorgolewski Marko Havu	1
+ PDF Chat	Grand challenges for global brain sciences	2016		1
+	De-anonymization Attacks on Neuroimaging Datasets	2019	Vikram Ravindra Ananth Grama	1
+	Region segmentation for sparse decompositions: better brain parcellations from rest fMRI	2014	Alexandre Abraham Elvis Dohmatob Bertrand Thirion Dimitris Samaras Gaël Varoquaux	1
+	The Elements of Statistical Learning	2009		1
+	Dynamic fluctuations coincide with periods of high and low modularity in resting-state functional brain networks	2015	Richard F. Betzel Makoto Fukushima Ye He Xi‐Nian Zuo Olaf Sporns	1
+	Human Cerebral Cortex: Localization, Parcellation, and Morphometry with Magnetic Resonance Imaging	1992	J. Rademacher Albert M. Galaburda David N. Kennedy Pauline A. Filipek V.S. Caviness	1
+ PDF Chat	Automatic parcellation of human cortical gyri and sulci using standard anatomical nomenclature	2010	Christophe Destrieux Bruce Fischl Anders M. Dale Eric Halgren	1
+ PDF Chat	Functional cartography of complex metabolic networks	2005	Roger Guimerà Luı́s A. Nunes Amaral	1
+ PDF Chat	A supervised clustering approach for fMRI-based inference of brain states	2011	Vincent Michel Alexandre Gramfort Gaël Varoquaux Evelyn Eger Christine Keribin Bertrand Thirion	1
+ PDF Chat	Computing scalable multivariate glocal invariants of large (brain-) graphs	2013	Disa Mhembere William Gray Roncal Daniel L. Sussman Carey E. Priebe Rex E. Jung Sephira G. Ryman R. Jacob Vogelstein Joshua T Vogelstein Randal Burns	1
+	How to use the diffusion model: Parameter recovery of three methods: EZ, fast-dm, and DMAT	2009	Don van Ravenzwaaij Klaus Oberauer	1
+ PDF Chat	Pathwise coordinate optimization	2007	Jerome H. Friedman Trevor Hastie Holger Höfling Robert Tibshirani	1