Nik J. Cunniffe

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All published works

Action	Title	Year	Authors
+ PDF Chat	Optimal Control Prevents Itself from Eradicating Stochastic Disease Epidemics	2024	Rachel Russell Nik J. Cunniffe
+	Identifiability and Observability in Epidemiological Models	2024	Nik J. Cunniffe Frédéric Hamelin Abderrahman Iggidr Alain Rapaport Gauthier Sallet
+	Mathematical Foundations	2024	Nik J. Cunniffe Frédéric Hamelin Abderrahman Iggidr Alain Rapaport Gauthier Sallet
+	Identifiability and Observability in Epidemiological Models - a survey -	2023	Nik J. Cunniffe Frédéric Hamelin Abderrahman Iggidr Alain Rapaport Gauthier Sallet
+	COVID-19 hospitalization rates rise exponentially with age, inversely proportional to thymic T-cell production	2021	Sam Palmer Nik J. Cunniffe Ruairí Donnelly
+ PDF Chat	Optimising Reactive Disease Management Using Spatially Explicit Models at the Landscape Scale	2021	Frédéric Fabre Jérôme Coville Nik J. Cunniffe
+ PDF Chat	Will an outbreak exceed available resources for control? Estimating the risk from invading pathogens using practical definitions of a severe epidemic	2020	Robin N. Thompson Christopher A. Gilligan Nik J. Cunniffe
+	COVID-19 hospitalisation rates rise exponentially with age, inversely proportional to thymic T-cell production	2020	Sam Palmer Nik J. Cunniffe Ruairí Donnelly
+	Key questions for modelling COVID-19 exit strategies	2020	Robin N. Thompson T. Déirdre Hollingsworth Valerie Isham Daniel Arribas‐Bel Ben Ashby Tom Britton Peter Challenor Lauren H. K. Chappell Hannah E. Clapham Nik J. Cunniffe
+	Key questions for modelling COVID-19 exit strategies: COVID-19 Exit Strategies	2020	Robin N. Thompson T. Déirdre Hollingsworth Valerie Isham Daniel Arribas‐Bel Ben Ashby Tom Britton Peter Challenor Lauren H. K. Chappell Hannah Clapham Nik J. Cunniffe
+	CHAPTER 12: Use of Mathematical Models to Predict Epidemics and to Optimize Disease Detection and Management	2020	Nik J. Cunniffe Christopher A. Gilligan
+	Observability, Identifiability and Epidemiology -- A survey	2020	Nik J. Cunniffe Frédéric Hamelin Abderrahman Iggidr Alain Rapaport Gauthier Sallet
+ PDF Chat	Coinfections by noninteracting pathogens are not independent and require new tests of interaction	2019	Frédéric Hamelin Linda J. S. Allen Vrushali A. Bokil Louis J. Gross Frank M. Hilker Michael Jeger Carrie A. Manore Alison G. Power Megan A. Rúa Nik J. Cunniffe
+	Coinfections by noninteracting pathogens are not independent and require new tests of interaction.	2019	Frédéric Hamelin Linda J. S. Allen Vrushali A. Bokil Louis J. Gross Frank M. Hilker Michael Jeger Carrie A. Manore Alison G. Power Megan A. Rúa Nik J. Cunniffe
+ PDF Chat	Will an outbreak exceed available resources for control? Estimating the risk from invading pathogens using practical definitions of a severe epidemic	2019	Robin N. Thompson Christopher A. Gilligan Nik J. Cunniffe
+	Accurate forecasts of the effectiveness of interventions against Ebola may require models that account for variations in symptoms during infection	2019	William S. Hart L.F.R. Hochfilzer Nik J. Cunniffe H. Lee Hiroshi Nishiura Robin N. Thompson
+ PDF Chat	Co-infections by non-interacting pathogens are not independent & require new tests of interaction	2019	Frédéric Hamelin Linda J. S. Allen Vrushali A. Bokil Louis J. Gross Frank M. Hilker Michael Jeger Carrie A. Manore Alison G. Power Megan A. Rúa Nik J. Cunniffe
+ PDF Chat	Accurate forecasts of the effectiveness of interventions against Ebola may require models that account for variations in symptoms during infection	2019	William S. Hart L.F.R. Hochfilzer Nik J. Cunniffe H. Lee Hiroshi Nishiura Robin N. Thompson
+	Supplementary material from "Applying optimal control theory to complex epidemiological models to inform real-world disease management"	2019	Nik J. Cunniffe
+	Supplementary material from "Evidence-based controls for epidemics using spatio-temporal stochastic models in a Bayesian framework"	2017	Hola Kwame Adrakey George Streftaris Nik J. Cunniffe T. R. Gottwald Christopher A. Gilligan Gavin J. Gibson
+ PDF Chat	Detecting Presymptomatic Infection Is Necessary to Forecast Major Epidemics in the Earliest Stages of Infectious Disease Outbreaks	2016	Robin N. Thompson Christopher A. Gilligan Nik J. Cunniffe

Common Coauthors

Coauthor	Papers Together
Frédéric Hamelin	7
Robin N. Thompson	7
Christopher A. Gilligan	5
Abderrahman Iggidr	4
William S. Hart	4
Gauthier Sallet	4
Alain Rapaport	4
Carrie A. Manore	3
Megan A. Rúa	3
Linda J. S. Allen	3
Vrushali A. Bokil	3
Alison G. Power	3
Frank M. Hilker	3
Louis J. Gross	3
Michael Jeger	3
István Z. Kiss	2
Nigel Gilbert	2
Rosalind M. Eggo	2
Martina Morris	2
Trevelyan J. McKinley	2
Julia R. Gog	2
A. P. Dawid	2
Denis Mollison	2
Kris V. Parag	2
Lauren H. K. Chappell	2
Juliet R. C. Pulliam	2
Alun L. Lloyd	2
Thomas House	2
Sebastian Funk	2
Cerian Ruth Webb	2
H. Lee	2
Joel C. Miller	2
James M. McCaw	2
Valerie Isham	2
T. Déirdre Hollingsworth	2
Lorenzo Pellis	2
Hans Heesterbeek	2
Hiroshi Nishiura	2
Peter Challenor	2
Hannah Clapham	2
Christl A. Donnelly	2
Emma S. McBryde	2
Gianpaolo Scalia Tomba	2
Carl A. B. Pearson	2
Joshua V. Ross	2
Ben Ashby	2
Ruairí Donnelly	2
Philip D. O’Neill	2
Olivier Restif	2
L.F.R. Hochfilzer	2

Commonly Cited References

Action	Title	Year	Authors	# of times referenced
+	Exact stochastic simulation of coupled chemical reactions	1977	Daniel T. Gillespie	6
+	Modeling Infectious Diseases in Humans and Animals	2011	Matt J. Keeling Pejman Rohani	6
+ PDF Chat	Detecting Presymptomatic Infection Is Necessary to Forecast Major Epidemics in the Earliest Stages of Infectious Disease Outbreaks	2016	Robin N. Thompson Christopher A. Gilligan Nik J. Cunniffe	6
+ PDF Chat	Rigorous surveillance is necessary for high confidence in end-of-outbreak declarations for Ebola and other infectious diseases	2019	Robin N. Thompson Oliver Morgan Katri Jalava	5
+	On the spread of a disease with gamma distributed latent and infectious periods	1980	Dorothy A. Anderson Ray Watson	5
+ PDF Chat	The basic reproductive number of Ebola and the effects of public health measures: the cases of Congo and Uganda	2004	Gerardo Chowell Nicolas Hengartner Carlos Castillo‐Chávez Paul W. Fenimore James M. Hyman	5
+	Superspreading and the effect of individual variation on disease emergence	2005	James O. Lloyd‐Smith Sebastian J. Schreiber Peter Ekkehard Kopp Wayne M. Getz	5
+	Modeling Infectious Diseases in Humans and Animals	2008	Matt J. Keeling Pejman Rohani	4
+ PDF Chat	Effect of Confusing Symptoms and Infectiousness on Forecasting and Control of Ebola Outbreaks	2018	Robin N. Thompson William S. Hart	4
+ PDF Chat	Estimating the Probability of a Major Outbreak from the Timing of Early Cases: An Indeterminate Problem?	2013	Meggan E. Craft Hawthorne L. Beyer Daniel T. Haydon	4
+ PDF Chat	Factors that make an infectious disease outbreak controllable	2004	Christophe Fraser Steven Riley Roy M. Anderson Neil M. Ferguson	4
+ PDF Chat	Generality of the Final Size Formula for an Epidemic of a Newly Invading Infectious Disease	2006	Junling Ma David J. D. Earn	4
+ PDF Chat	Measuring the impact of Ebola control measures in Sierra Leone	2015	Adam J. Kucharski Anton Camacho Stefan Flasche R. E. Glover W. John Edmunds Sebastian Funk	4
+ PDF Chat	Novel Coronavirus Outbreak in Wuhan, China, 2020: Intense Surveillance Is Vital for Preventing Sustained Transmission in New Locations	2020	Robin N. Thompson	3
+ PDF Chat	Transmission dynamics and control of Ebola virus disease (EVD): a review	2014	Gerardo Chowell Hiroshi Nishiura	3
+ PDF Chat	Sustained transmission of Ebola in new locations: more likely than previously thought	2019	Robin N. Thompson Katri Jalava Uri Obolski	3
+	Modeling the Impact of Interventions on an Epidemic of Ebola in Sierra Leone and Liberia	2014	Caitlin Rivers Eric Lofgren Madhav Marathe Stephen Eubank Bryan Lewis	3
+ PDF Chat	Different Epidemic Curves for Severe Acute Respiratory Syndrome Reveal Similar Impacts of Control Measures	2004	Jacco Wallinga	3
+ PDF Chat	A New Framework and Software to Estimate Time-Varying Reproduction Numbers During Epidemics	2013	Anne Cori Neil M. Ferguson Christophe Fraser Simon Cauchemez	3
+ PDF Chat	Appropriate Models for the Management of Infectious Diseases	2005	Helen J. Wearing Pejman Rohani Matt J. Keeling	3
+ PDF Chat	Age-dependent effects in the transmission and control of COVID-19 epidemics	2020	Nicholas G. Davies Petra Klepac Yang Liu Kiesha Prem Mark Jit Carl A. B. Pearson Billy J. Quilty Adam J. Kucharski Hamish Gibbs Samuel Clifford	3
+ PDF Chat	Estimating the effects of non-pharmaceutical interventions on COVID-19 in Europe	2020	Seth Flaxman Swapnil Mishra Axel Gandy H. Juliette T. Unwin Thomas A. Mellan Helen Coupland Charles Whittaker Harrison Zhu Tresnia Berah Jeffrey W. Eaton	3
+	Estimating the Reproduction Number of Ebola Virus (EBOV) During the 2014 Outbreak in West Africa	2014	Christian L. Althaus	3
+ PDF Chat	Projecting the transmission dynamics of SARS-CoV-2 through the postpandemic period	2020	Stephen M. Kissler Christine Tedijanto Edward Goldstein Yonatan H. Grad Marc Lipsitch	3
+	Improved inference of time-varying reproduction numbers during infectious disease outbreaks	2019	Robin N. Thompson J.E. Stockwin Rolina D. van Gaalen Jonathan A. Polonsky Zhian N. Kamvar P.A. Demarsh Elisabeth Dahlqwist S. Li Eve Miguel Thibaut Jombart	3
+ PDF Chat	Epidemiological models are important tools for guiding COVID-19 interventions	2020	Robin N. Thompson	3
+ PDF Chat	A metapopulation model for the 2018 Ebola virus disease outbreak in Equateur province in the Democratic Republic of the Congo	2018	Sophie Meakin Mike J. Tildesley Emma L. Davis Matt J. Keeling	3
+	Extinction Times and Phase Transitions for Spatially Structured Closed Epidemics	1998	J. Swinton	3
+	Estimating the time-varying reproduction number of SARS-CoV-2 using national and subnational case counts	2020	Sam Abbott Joel Hellewell Robin N. Thompson Katharine Sherratt Hamish Gibbs Nikos I Bosse James D. Munday Sophie Meakin Emma L. Doughty June Young Chun	3
+ PDF Chat	On methods for studying stochastic disease dynamics	2007	Matt J. Keeling Joshua V. Ross	3
+	The Effective Reproduction Number as a Prelude to Statistical Estimation of Time-Dependent Epidemic Trends	2009	Hiroshi Nishiura Gerardo Chowell	3
+ PDF Chat	Strategies for containing Ebola in West Africa	2014	Abhishek Pandey Katherine E. Atkins Jan Medlock Natasha Wenzel Jeffrey P. Townsend James E. Childs Tolbert Nyenswah Martial L. Ndeffo-Mbah Alison P. Galvani	3
+ PDF Chat	Mathematical modelling of infectious diseases	2009	Matt J. Keeling León Danon	3
+ PDF Chat	Modelling the effect of early detection of Ebola	2015	Diego Chowell Carlos Castillo‐Chávez Sri Krishna Xiangguo Qiu Karen S. Anderson	3
+ PDF Chat	Spread of epidemic disease on networks	2002	M. E. J. Newman	3
+ PDF Chat	Transmission Dynamics and Final Epidemic Size of Ebola Virus Disease Outbreaks with Varying Interventions	2015	Maria Vittoria Barbarossa Attila Dénes Gábor Kiss Yukihiko Nakata Gergely Röst Zsolt Vizi	3
+	Ebola virus disease outbreak in Nigeria: Transmission dynamics and rapid control	2015	Christian L. Althaus Nicola Low Emmanuel Musa Faisal Shuaib Sandro Gsteiger	3
+ PDF Chat	Ebola Virus Disease in West Africa — The First 9 Months of the Epidemic and Forward Projections	2014		3
+ PDF Chat	Solution of an infection model near threshold	2007	David A. Kessler Nadav M. Shnerb	3
+	Estimating the future number of cases in the Ebola epidemic--Liberia and Sierra Leone, 2014-2015.	2014	Meltzer Mi Atkins Cy Scott Santibañez Barbara Knust Petersen Bw Elizabeth Ervin Nichol St Damon Ik Washington Ml	2
+ PDF Chat	How big is an outbreak likely to be? Methods for epidemic final-size calculation	2012	Thomas House Joshua V. Ross David Sirl	2
+	Age profile of immunity to influenza: Effect of original antigenic sin	2011	Adam J. Kucharski Julia R. Gog	2
+	The concept of herd immunity and the design of community-based immunization programmes	1992	Roy M. Anderson	2
+ PDF Chat	Perspectives on the basic reproductive ratio	2005	Jane M. Heffernan Robert J. Smith Lindi M. Wahl	2
+ PDF Chat	Characterizing the Transmission Dynamics and Control of Ebola Virus Disease	2015	Gerardo Chowell Hiroshi Nishiura	2
+	Some properties of a simple stochastic epidemic model of SIR type	2006	Henry C. Tuckwell Ruth Williams	2
+ PDF Chat	Mathematical assessment of the effect of traditional beliefs and customs on the transmission dynamics of the 2014 Ebola outbreaks	2015	Folashade B. Agusto Miranda I. Teboh-Ewungkem Abba B. Gumel	2
+ PDF Chat	Epidemics with two levels of mixing	1997	Frank Ball Denis Mollison Gianpaolo Scalia‐Tomba	2
+ PDF Chat	Spatiotemporal spread of the 2014 outbreak of Ebola virus disease in Liberia and the effectiveness of non-pharmaceutical interventions: a computational modelling analysis	2015	Stefano Merler Marco Ajelli Laura Fumanelli Marcelo Ferreira da Costa Gomes Ana Pastore y Piontti Luca Rossi Dennis L. Chao Ira M. Longini M. Elizabeth Halloran Alessandro Vespignani	2
+ PDF Chat	School Closure and Mitigation of Pandemic (H1N1) 2009, Hong Kong	2010	Joseph T. Wu Benjamin J. Cowling Eric H. Y. Lau Dkm Ip LM Ho Thomas Tsang Shuk-Kwan Chuang Pak-Yin Leung Su‐Vui Lo Shao‐Haei Liu	2