Bernadette J. Stolz

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All published works

Action	Title	Year	Authors
+ PDF Chat	Enhanced perfusion following exposure to radiotherapy: A theoretical investigation	2024	Jakub Köry V.S. Narain Bernadette J. Stolz Jakob Kaeppler Boštjan Markelc Ruth J. Muschel Philip K. Maini Joe Pitt‐Francis Helen M. Byrne
+ PDF Chat	Enhanced perfusion following exposure to radiotherapy: a theoretical investigation	2023	Jakub Köry V.S. Narain Bernadette J. Stolz Jakob Kaeppler Boštjan Markelc Ruth J. Muschel Philip K. Maini Joe Pitt‐Francis Helen M. Byrne
+	Relational persistent homology for multispecies data with application to the tumor microenvironment	2023	Bernadette J. Stolz Jagdeep Dhesi Joshua A. Bull Heather A. Harrington Helen M. Byrne Hee Rhang Yoon
+ PDF Chat	Multiscale topology characterizes dynamic tumor vascular networks	2022	Bernadette J. Stolz Jakob Kaeppler Boštjan Markelc Franziska Braun Florian Lipsmeier Ruth J. Muschel Helen M. Byrne Heather A. Harrington
+ PDF Chat	Topological data analysis distinguishes parameter regimes in the Anderson-Chaplain model of angiogenesis	2021	John T. Nardini Bernadette J. Stolz Kevin Flores Heather A. Harrington Helen M. Byrne
+	Topological data analysis of task-based fMRI data from experiments on schizophrenia	2021	Bernadette J. Stolz Tegan Emerson Satu Nahkuri Mason A. Porter Heather A. Harrington
+	Outlier-robust subsampling techniques for persistent homology	2021	Bernadette J. Stolz
+	Outlier-robust subsampling techniques for persistent homology	2021	Bernadette J. Stolz
+	Multiscale Topology Characterises Dynamic Tumour Vascular Networks	2020	Bernadette J. Stolz Jakob Kaeppler Boštjan Markelc Franziska Mech Florian Lipsmeier Ruth J. Muschel Helen M. Byrne Heather A. Harrington
+ PDF Chat	Geometric anomaly detection in data	2020	Bernadette J. Stolz Jared Tanner Heather A. Harrington Vidit Nanda
+	Multiscale Topology Characterises Dynamic Tumour Vascular Networks	2020	Bernadette J. Stolz Jakob Kaeppler Boštjan Markelc Franziska Mech Florian Lipsmeier Ruth J. Muschel Helen M. Byrne Heather A. Harrington
+	Geometric anomaly detection in data	2019	Bernadette J. Stolz Jared Tanner Heather A. Harrington Vidit Nanda
+	Topological Methods for Characterising Spatial Networks: A Case Study in Tumour Vasculature	2019	Helen M. Byrne Heather A. Harrington Ruth J. Muschel Gesine Reinert Bernadette J. Stolz Ulrike Tillmann
+	Topological Data Analysis of Task-Based fMRI Data from Experiments on Schizophrenia	2018	Bernadette J. Stolz Tegan Emerson Satu Nahkuri Mason A. Porter Heather A. Harrington
+	Topological Data Analysis of Task-Based fMRI Data from Experiments on Schizophrenia	2018	Bernadette J. Stolz Tegan Emerson Satu Nahkuri Mason A. Porter Heather A. Harrington
+ PDF Chat	Persistent homology of time-dependent functional networks constructed from coupled time series	2017	Bernadette J. Stolz Heather A. Harrington Mason A. Porter
+	The Topological "Shape" of Brexit.	2016	Bernadette J. Stolz Heather A. Harrington Mason A. Porter
+ PDF Chat	The Topological 'Shape' of Brexit	2016	Bernadette J. Stolz Heather A. Harrington Mason A. Porter
+	The Topological "Shape" of Brexit	2016	Bernadette J. Stolz Heather A. Harrington Mason A. Porter

Common Coauthors

Coauthor	Papers Together
Heather A. Harrington	15
Helen M. Byrne	8
Mason A. Porter	7
Ruth J. Muschel	6
Boštjan Markelc	5
Jakob Kaeppler	5
Satu Nahkuri	3
Florian Lipsmeier	3
Tegan Emerson	3
Vidit Nanda	2
Joe Pitt‐Francis	2
Philip K. Maini	2
Jakub Köry	2
Jared Tanner	2
V.S. Narain	2
Franziska Mech	1
Franziska Braun	1
John T. Nardini	1
Hee Rhang Yoon	1
Gesine Reinert	1
Kevin Flores	1
Franziska Mech	1
Ulrike Tillmann	1
Joshua A. Bull	1
Jagdeep Dhesi	1

Commonly Cited References

Action	Title	Year	Authors	# of times referenced
+ PDF Chat	A roadmap for the computation of persistent homology	2017	Nina Otter Mason A. Porter Ulrike Tillmann Peter Grindrod Heather A. Harrington	11
+	Persistent homology analysis of brain artery trees	2016	Paul Bendich J. S. Marron Ezra Miller Alex Pieloch Sean Skwerer	7
+ PDF Chat	Stability of Persistence Diagrams	2006	David Cohen‐Steiner Herbert Edelsbrunner John Harer	7
+	Clique topology reveals intrinsic geometric structure in neural correlations	2015	Chad Giusti Eva Pastalkova Carina Curto Vladimir Itskov	7
+ PDF Chat	Barcodes: The persistent topology of data	2007	Robert Ghrist	6
+ PDF Chat	Topological data analysis of contagion maps for examining spreading processes on networks	2015	Dane Taylor Florian Klimm Heather A. Harrington Miroslav Kramár Konstantin Mischaikow Mason A. Porter Peter J. Mucha	5
+	Persistence Images: A Stable Vector Representation of Persistent Homology	2015	Henry Adams Tegan Emerson Michael Kirby Rachel Neville Chris Peterson Patrick D. Shipman Sofya Chepushtanova Eric Hanson Francis C. Motta Lori Ziegelmeier	5
+	Persistent homology—a survey	2008	Herbert Edelsbrunner John Harer	5
+ PDF Chat	Persistent homology of time-dependent functional networks constructed from coupled time series	2017	Bernadette J. Stolz Heather A. Harrington Mason A. Porter	5
+	Using persistent homology and dynamical distances to analyze protein binding	2016	Violeta Kovačev-Nikolić Peter Bubenik Dragan Nikolić Giseon Heo	5
+ PDF Chat	Topological Strata of Weighted Complex Networks	2013	Giovanni Petri Martina Scolamiero Irene Donato Francesco Vaccarino	4
+	Microvessel Chaste: An Open Library for Spatial Modeling of Vascularized Tissues	2017	James A. Grogan Anthony J. Connor Boštjan Markelc Ruth J. Muschel Philip K. Maini Helen M. Byrne Joe Pitt‐Francis	4
+	A First Course in Algebraic Topology	1980	Czes Kosniowski	4
+	A Topological Representation of Branching Neuronal Morphologies	2017	Lida Kanari Paweł Dłotko Martina Scolamiero Ran Levi Julian C. Shillcock Kathryn Hess Henry Markram	4
+ PDF Chat	Topological Data Analysis of Biological Aggregation Models	2015	Chad M. Topaz Lori Ziegelmeier Tom Halverson	4
+ PDF Chat	What can topology tell us about the neural code?	2016	Carina Curto	4
+	A persistence landscapes toolbox for topological statistics	2016	Peter Bubenik Paweł Dłotko	4
+	PERSISTENCE BARCODES FOR SHAPES	2005	Gunnar Carlsson Afra Zomorodian Anne M. Collins Leonidas Guibas	3
+ PDF Chat	Topological data analysis of zebrafish patterns	2020	Melissa McGuirl Alexandria Volkening Björn Sandstede	3
+ PDF Chat	Topological data analysis distinguishes parameter regimes in the Anderson-Chaplain model of angiogenesis	2021	John T. Nardini Bernadette J. Stolz Kevin Flores Heather A. Harrington Helen M. Byrne	3
+	Predicting the Influence of Microvascular Structure On Tumor Response to Radiotherapy	2016	James A. Grogan Boštjan Markelc Anthony J. Connor Ruth J. Muschel Joe Pitt‐Francis Philip K. Maini Helen M. Byrne	3
+	Applying Topological Persistence in Convolutional Neural Network for Music Audio Signals	2016	Jen-Yu Liu Shyh‐Kang Jeng Yi‐Hsuan Yang	3
+ PDF Chat	A multiscale model of complex endothelial cell dynamics in early angiogenesis	2021	Daria Stepanova Helen M. Byrne Philip K. Maini Tomás Alarcón	3
+ PDF Chat	Topological analysis of the connectome of digital reconstructions of neural microcircuits	2016	Paweł Dłotko Kathryn Hess Levi Ran Henry Markram Eilif Müller Max Nolte Michael W. Reimann Martina Scolamiero Katharine Turner	3
+ PDF Chat	Community detection in networks: A user guide	2016	Santo Fortunato Darko Hric	3
+	Dynamic reconfiguration of human brain networks during learning	2011	Danielle S. Bassett Nicholas F. Wymbs Mason A. Porter Peter J. Mucha Jean M. Carlson Scott T. Grafton	3
+	Basic Concepts of Algebraic Topology	1978	Fred H. Croom	3
+	Statistical topological data analysis using persistence landscapes	2015	Peter Bubenik	3
+ PDF Chat	Computing Persistent Homology	2004	Afra Zomorodian Gunnar Carlsson	3
+ PDF Chat	Cross-linked structure of network evolution	2014	Danielle S. Bassett Nicholas F. Wymbs Mason A. Porter Peter J. Mucha Scott T. Grafton	3
+ PDF Chat	The importance of the whole: Topological data analysis for the network neuroscientist	2018	Ann E. Sizemore Jennifer E. Phillips‐Cremins Robert Ghrist Danielle S. Bassett	3
+	Cluster failure: Why fMRI inferences for spatial extent have inflated false-positive rates	2016	Anders Eklund Thomas E. Nichols Hans Knutsson	3
+ PDF Chat	Angiogenesis and vascular remodelling in normal and cancerous tissues	2008	Markus R. Owen Tomás Alarcón Philip K. Maini Helen M. Byrne	3
+	Continuous and Discrete Mathematical Models of Tumor-induced Angiogenesis	1998	Alexander R.A. Anderson	3
+	javaPlex: A Research Software Package for Persistent (Co)Homology	2014	Henry Adams Andrew Tausz Mikael Vejdemo‐Johansson	3
+	Role of Tumor Vascular Architecture in Nutrient and Drug Delivery: An Invasion Percolation-Based Network Model	1996	James W. Baish Yuval Gazit David A. Berk Mutsumi Nozue Laurence T. Baxter Rakesh K. Jain	3
+ PDF Chat	Functional brain networks: great expectations, hard times and the big leap forward	2014	David Papo Massimiliano Zanin Jose Á. Pineda‐Pardo Stefano Boccaletti Javier M. Buldú	3
+ PDF Chat	Persistent Homology for Path Planning in Uncertain Environments	2015	Subhrajit Bhattacharya Robert Ghrist Vijay Kumar	2
+ PDF Chat	Effect of fractional blood flow on plasma skimming in the microvasculature	2017	Ji-Ho Yang Sung Sic Yoo Tae-Rin Lee	2
+	Mathematical modeling of tumor-induced angiogenesis	2004	Nikos V. Mantzaris S. David Webb Hans G. Othmer	2
+	3D hybrid modelling of vascular network formation	2016	Holger Perfahl Barry D. Hughes Tomás Alarcón Philip K. Maini Mark C. Lloyd Matthias Reuß Helen M. Byrne	2
+	Computational Modeling of Tumor-Induced Angiogenesis	2017	Guillermo Vilanova Ignasi Colominas Héctor Gómez	2
+ PDF Chat	A Validated Multiscale In-Silico Model for Mechano-sensitive Tumour Angiogenesis and Growth	2017	Vasileios Vavourakis P. A. Wijeratne Rebecca J. Shipley Marilena Loizidou Triantafyllos Stylianopoulos David J. Hawkes	2
+ PDF Chat	3D Multi-Cell Simulation of Tumor Growth and Angiogenesis	2009	Abbas Shirinifard J. Scott Gens Benjamin Zaitlen Nikodem J. Popławski Maciej Swat James A. Glazier	2
+ PDF Chat	Morse Theory for Filtrations and Efficient Computation of Persistent Homology	2013	Konstantin Mischaikow Vidit Nanda	2
+ PDF Chat	Multifractal and Lacunarity Analysis of Microvascular Morphology and Remodeling	2010	Daniel J. Gould Tegy J. Vadakkan Ross A. Poché Mary E. Dickinson	2
+ PDF Chat	Intra- and Inter-Frequency Brain Network Structure in Health and Schizophrenia	2013	Felix Siebenhühner Shennan A. Weiss Richard Coppola Daniel R. Weinberger Danielle S. Bassett	2
+	Matroid Filtrations and Computational Persistent Homology	2016	Gregory Henselman Robert Ghrist	2
+ PDF Chat	Computational and Mathematical Modeling of Angiogenesis	2008	Shayn M. Peirce	2
+ PDF Chat	A Multiple Scale Model for Tumor Growth	2005	Tomás Alarcón Helen M. Byrne Philip K. Maini	2