Katherine S. Pollard

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All published works

Action	Title	Year	Authors
+	Weighted normalized UniFrac distances	2018	Daniel McDonald Daniel McDonald Adam Robbins‐Pianka Allison E. Mann Alison Vrbanac Amnon Amir Angel Frazier Antonio González-Torres Anupriya Tripathi Ashkaan K. Fahimipour
+ PDF Chat	motifDiverge: a model for assessing the statistical significance of gene regulatory motif divergence between two DNA sequences	2015	Dennis Kostka Tara Friedrich Alisha K. Holloway Katherine S. Pollard
+ PDF Chat	Integrating Diverse Datasets Improves Developmental Enhancer Prediction	2014	Genevieve D. Erwin Nir Oksenberg Rebecca Truty Dennis Kostka Karl K. Murphy Nadav Ahituv Katherine S. Pollard John A. Capra
+	motifDiverge: a model for assessing the statistical significance of gene regulatory motif divergence between two DNA sequences	2014	Dennis Kostka Tara Friedrich Alisha K. Holloway Katherine S. Pollard
+	motifDiverge: a model for assessing the statistical significance of gene regulatory motif divergence between two DNA sequences	2014	Dennis Kostka Tara Friedrich Alisha K. Holloway Katherine S. Pollard
+ PDF Chat	A Model-Based Analysis of GC-Biased Gene Conversion in the Human and Chimpanzee Genomes	2013	John A. Capra Melissa J. Hubisz Dennis Kostka Katherine S. Pollard Adam Siepel
+	A Model-Based Analysis of GC-Biased Gene Conversion in the Human and Chimpanzee Genomes	2013	John A. Capra Melissa J. Hubisz Dennis Kostka Katherine S. Pollard Adam Siepel
+	A Model-Based Analysis of GC-Biased Gene Conversion in the Human and Chimpanzee Genomes	2013	John A. Capra Melissa J. Hubisz Dennis Kostka Katherine S. Pollard Adam Siepel
+	Hypothesis Tests for Point-Mass Mixture Data with Application to `Omics Data with Many Zero Values	2009	Sandra L. Taylor Katherine S. Pollard
+	Resampling-Based Multiple Hypothesis Testing with Applications to Genomics: New Developments in the R/Bioconductor Package multtest	2009	Houston Gilbert Katherine S. Pollard Mark J. van der Laan Sandrine Dudoit
+ PDF Chat	Evaluation of Two Methods to Estimate and Monitor Bird Populations	2008	Sandra L. Taylor Katherine S. Pollard
+	Test Statistics Null Distributions in Multiple Testing: Simulation Studies and Applications to Genomics	2005	Katherine S. Pollard Merrill D. Birkner Mark J. van der Laan Sandrine Dudoit
+	Multiple Testing Procedures: the multtest Package and Applications to Genomics	2005	Katherine S. Pollard Sandrine Dudoit Mark J. van der Laan
+	Multiple Testing. Part II. Step-Down Procedures for Control of the Family-Wise Error Rate	2004	Mark van der Laan Sandrine Dudoit Katherine S. Pollard
+	Multiple Testing. Part I. Single-Step Procedures for Control of General Type I Error Rates	2004	Sandrine Dudoit Mark van der Laan Katherine S. Pollard
+	Multiple Testing. Part III. Procedures for Control of the Generalized Family-Wise Error Rate and Proportion of False Positives	2004	Mark J. van der Laan Sandrine Dudoit Katherine S. Pollard
+	Choice of a null distribution in resampling-based multiple testing	2004	Katherine S. Pollard Mark J. van der Laan
+	Augmentation Procedures for Control of the Generalized Family-Wise Error Rate and Tail Probabilities for the Proportion of False Positives	2004	Mark J. van der Laan Sandrine Dudoit Katherine S. Pollard
+ PDF Chat	Multiple Testing. Part II. Step-Down Procedures for Control of the Family-Wise Error Rate	2004	Mark J. van der Laan Sandrine Dudoit Katherine S. Pollard
+ PDF Chat	Multiple Testing. Part I. Single-Step Procedures for Control of General Type I Error Rates	2004	Sandrine Dudoit Mark J. van der Laan Katherine S. Pollard
+	Resampling-based Multiple Testing: Asymptotic Control of Type I Error and Applications to Gene Expression Data	2003	Katherine S. Pollard Mark J. van der Laan
+	Resampling-based multiple testing with asymptotic strong control of type I error	2003	Katherine S. Pollard Mark J. van der Laan
+	Multiple Testing for Gene Expression Data: An Investigation of Null Distributions with Consequences for the Permutation Test.	2003	Katherine S. Pollard Mark J. van der Laan
+ PDF Chat	Statistical Inference for Simultaneous Clustering of Gene Expression Data	2003	Katherine S. Pollard Mark J. van der Laan
+ PDF Chat	Statistical inference for simultaneous clustering of gene expression data	2002	Katherine S. Pollard Mark J. van der Laan

Common Coauthors

Coauthor	Papers Together
Mark J. van der Laan	13
Sandrine Dudoit	9
Dennis Kostka	7
John A. Capra	4
Adam Siepel	3
Melissa J. Hubisz	3
Tara Friedrich	3
Alisha K. Holloway	3
Sandra L. Taylor	2
Mark van der Laan	2
Max Abramson	1
Se Jin Song	1
Paul E. Wischmeyer	1
Curtis Huttenhower	1
José A. Navas-Molina	1
Joshua Shorenstein	1
Karenina Sanders	1
Genevieve D. Erwin	1
Rachel S. Park	1
Luke Thompson	1
Alexey V. Melnik	1
Matthew Jackson	1
Joshua Ladau	1
Christina Warinner	1
Chris Callewaert	1
Elaine Wolfe	1
Evan Bolyen	1
Jacqueline Kerr	1
Dorothy D. Sears	1
Frederic D. Bushman	1
Austin D. Swafford	1
Susan Holmes	1
Merrill D. Birkner	1
Evguenia Kopylova	1
Clarisse Marotz	1
Tifani W. Eshoo-Anton	1
Dmitry Meleshko	1
Alison Vrbanac	1
Christopher A. Lowry	1
Nadim J. Ajami	1
Shyamal Peddada	1
Daniel McDonald	1
Emily TerAvest	1
Jeroen Raes	1
Tim Vigers	1
Scott R. Klemmer	1
Yoshiki Vázquez‐Baeza	1
Charles L. Raison	1
Robert R. Dunn	1
Alexander A. Aksenov	1

Commonly Cited References

Action	Title	Year	Authors	# of times referenced
+	Resampling-Based Multiple Testing: Examples and Methods for p-Value Adjustment.	1994	Michael A. Martin Peter H. Westfall S. Stanley Young	10
+	Controlling the False Discovery Rate: A Practical and Powerful Approach to Multiple Testing	1995	Yoav Benjamini Yosef Hochberg	9
+	Multiple Comparison Procedures	2013	Y. Hochberg Ajit C. Tamhane	7
+ PDF Chat	Multiple Testing. Part I. Single-Step Procedures for Control of General Type I Error Rates	2004	Sandrine Dudoit Mark J. van der Laan Katherine S. Pollard	5
+ PDF Chat	Multiple Testing. Part II. Step-Down Procedures for Control of the Family-Wise Error Rate	2004	Mark J. van der Laan Sandrine Dudoit Katherine S. Pollard	5
+	Resampling-based Multiple Testing: Asymptotic Control of Type I Error and Applications to Gene Expression Data	2003	Katherine S. Pollard Mark J. van der Laan	5
+	Resampling-based false discovery rate controlling multiple test procedures for correlated test statistics	1999	Daniel Yekutieli Yoav Benjamini	5
+ PDF Chat	In silico prediction of protein-protein interactions in human macrophages	2014	Oussema Souiai Fatma Z. Guerfali Slimane Ben Miled Christine Brun Alia Benkahla	4
+ PDF Chat	Gene expression analysis with the parametric bootstrap	2001	Mark J. van der Laan	4
+	Weak Convergence and Empirical Processes	1996	Aad van der Vaart Jon A. Wellner	4
+ PDF Chat	Statistical inference for simultaneous clustering of gene expression data	2002	Katherine S. Pollard Mark J. van der Laan	4
+ PDF Chat	The control of the false discovery rate in multiple testing under dependency	2001	Yoav Benjamini Daniel Yekutieli	3
+	Nonparametric Methods in Multivariate Analysis	1972	Olive Jean Dunn Madan L. Puri Pranab Kumar Sen	3
+	Choice of a null distribution in resampling-based multiple testing	2004	Katherine S. Pollard Mark J. van der Laan	3
+ PDF Chat	Multiple Testing Procedures with Applications to Genomics	2007	Sandrine Dudoit Mark J. van der Laan	3
+	A Simple Sequentially Rejective Multiple Test Procedure	1979	Sture Holm	3
+	Augmentation Procedures for Control of the Generalized Family-Wise Error Rate and Tail Probabilities for the Proportion of False Positives	2004	Mark J. van der Laan Sandrine Dudoit Katherine S. Pollard	3
+	A sharper Bonferroni procedure for multiple tests of significance	1988	Yosef Hochberg	3
+	Resampling-Based Multiple Testing: Examples and Methods for p-Value Adjustment.	1994	G. E. Thomas Peter H. Westfall S. Stanley Young	2
+	Multiple Testing. Part III. Procedures for Control of the Generalized Family-Wise Error Rate and Proportion of False Positives	2004	Mark J. van der Laan Sandrine Dudoit Katherine S. Pollard	2
+	Empirical Bayes and Resampling Based Multiple Testing Procedure Controlling Tail Probability of the Proportion of False Positives.	2005	Mark J. van der Laan Merrill D. Birkner Alan Hubbard	2
+	Resampling-based multiple testing for microarray data analysis	2003	Yongchao Ge Sandrine Dudoit Terence P. Speed	2
+	Resampling-Based Multiple Testing: Examples and Methods for p-Value Adjustment	1993	Yogendra P. Chaubey Peter H. Westfall Stefano Young	2
+ PDF Chat	Incorporating retrospective data into an analysis of time to illness	2001	Andrew Copas	2
+	Prepivoting Test Statistics: A Bootstrap View of Asymptotic Refinements	1988	Rudolf Beran	2
+	Testing Statistical Hypotheses	2021	E. L. Lehmann	2
+	Coupled two-way clustering analysis of gene microarray data	2000	Gad Getz Erel Levine Eytan Domany	2
+	Multiple Testing Procedures for Controlling Tail Probability Error Rates	2004	Sandrine Dudoit Mark J. van der Laan Merrill D. Birkner	2
+ PDF Chat	Identifying differentially expressed genes using false discovery rate controlling procedures	2003	Anat Reiner‐Benaim Daniel Yekutieli Yoav Benjamini	2
+ PDF Chat	Statistical Inference in Bernoulli Trials with Dependence	1973	Jerome Klotz	2
+ PDF Chat	A Direct Approach to False Discovery Rates	2002	John D. Storey	2
+	Multiple Hypothesis Testing	1995	J. Shaffer	1
+	Prepivoting Test Statistics: A Bootstrap View of Asymptotic Refinements	1988	Rudolf Beran	1
+	Modeling Capture, Recapture, and Removal Statistics for Estimation of Demographic Parameters for Fish and Wildlife Populations: Past, Present, and Future	1991	Kenneth H. Pollock	1
+	Balanced Simultaneous Confidence Sets	1988	Rudolf Beran	1
+	A Sharper Bonferroni Procedure for Multiple Tests of Significance	1988	Yosef Hochberg	1
+	Inefficient estimators of the bivariate survival function for three models	1995	Richard D. Gill Mark J. van der Laan Jon A. Wellner	1
+	Modern Applied Statistics with S	2002	W. N. Venables B. D. Ripley	1
+	Unified Methods for Censored Longitudinal Data and Causality	2003	Mark J. van der Laan James M. Robins	1
+	Adaptive linear step-up procedures that control the false discovery rate	2006	Yoav Benjamini Abba M. Krieger Daniel Yekutieli	1
+ PDF Chat	Bootstrapping General Empirical Measures	1990	Evarist Giné Joel Zinn	1
+ PDF Chat	John W. Tukey's contributions to multiple comparisons	2002	Yoav Benjamini Henry Braun	1
+	A Stepwise Resampling Method of Multiple Hypothesis Testing	1995	James Troendle	1
+	Non- and semi-parametric maximum likelihood estimators and the Von Mises method	1986	Richard D. Gill	1
+	Model-Based Clustering, Discriminant Analysis, and Density Estimation	2002	Chris Fraley Adrian E. Raftery	1
+	Introduction to the Practice of Statistics	2004	David S. Moore George P. McCabe	1
+	Nonparametric Methods in Multivariate Analysis	1972	Olive Jean Dunn	1
+	A stagewise rejective multiple test procedure based on a modified Bonferroni test	1988	Gerhard Hommel	1
+	Rectangular Confidence Regions for the Means of Multivariate Normal Distributions	1967	Zbyněk Šidák	1
+	Hypothesis Tests for Point-Mass Mixture Data with Application to `Omics Data with Many Zero Values	2009	Sandra L. Taylor Katherine S. Pollard	1